Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938612 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 54426263 ~ 54426404 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035819.1 | True | 142 | mRNA | 0.44 | 1 | 54426263 | 54426404 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch73-374l24.1 | LOC105026133 | coding | downstream | 376671 | 53806640 ~ 54049592 (-) |
| cacng5b | LOC106606721 | coding | downstream | 622911 | 53793576 ~ 53803352 (-) |
| LOC110486794 | LOC108245165 | coding | downstream | 700994 | 53713123 ~ 53725269 (-) |
| LOC110486791 | LOC106601672 | coding | downstream | 717993 | 53699239 ~ 53708270 (-) |
| LOC110486790 | LOC106606738 | coding | downstream | 736059 | 53680096 ~ 53690204 (-) |
| LOC110538769 | NA | coding | upstream | 32 | 54426436 ~ 54427451 (-) |
| LOC118938329 | aqp8 | coding | upstream | 310310 | 54736714 ~ 54740723 (-) |
| LOC110486825 | LOC106606691 | coding | upstream | 315075 | 54741479 ~ 54748709 (-) |
| LOC110485228 | LOC106606689 | coding | upstream | 386718 | 54813122 ~ 54831352 (-) |
| LOC110486827 | LOC106606694 | coding | upstream | 406706 | 54809618 ~ 54889445 (-) |
| G1188115 | NA | non-coding | downstream | 28633 | 54397276 ~ 54397630 (-) |
| G1188106 | NA | non-coding | downstream | 77933 | 54348130 ~ 54348330 (-) |
| G1188083 | NA | non-coding | downstream | 135136 | 54290835 ~ 54291127 (-) |
| G1188082 | LOC106606676 | non-coding | downstream | 135658 | 54290305 ~ 54290605 (-) |
| G1188073 | NA | non-coding | downstream | 161239 | 54264036 ~ 54265024 (-) |
| G1188146 | LOC106601756 | non-coding | upstream | 26742 | 54453146 ~ 54455169 (-) |
| G1188128 | NA | non-coding | upstream | 31206 | 54457610 ~ 54549633 (-) |
| G1188155 | NA | non-coding | upstream | 85774 | 54512178 ~ 54517142 (-) |
| G1188161 | NA | non-coding | upstream | 97294 | 54523698 ~ 54524645 (-) |
| mosmoa | C20H16orf52 | other | downstream | 788450 | 53607021 ~ 53638313 (-) |
| G1186670 | LOC100194703 | other | downstream | 1766454 | 52659331 ~ 52659809 (-) |
| G1186381 | NA | other | downstream | 2395603 | 51924963 ~ 52030660 (-) |
| G1186216 | NA | other | downstream | 2415052 | 52010690 ~ 52011211 (-) |
| G1188147 | NA | other | upstream | 22479 | 54448883 ~ 54450020 (-) |
| G1188127 | LOC106601757 | other | upstream | 39129 | 54409911 ~ 54470838 (-) |
| G1188186 | LOC106588841 | other | upstream | 172997 | 54599401 ~ 54600449 (-) |
