LOC110486811 (LOC106601768)


Basic Information

Item Value
gene id LOC110486811
gene name LOC106601768
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 54720661 ~ 54731365 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941539.1
CATATTCTATGCAATAAATCGAGAATATTCGTGTGAAAATGTATGTCAGGTAAGGTTCAATGGACGACCTTGACCTATAGTTAACAATTACCCTTATACACAACTCTGTGCTCCGGTGCAGCAGCCAGTGCAGTTGGAGCTCGGCGGTTGAATTGTTCCCTGGACTCCGTGATGTGTGTCAAATCAGTTCAGCacagctgggactgggactggcgaTATTTTAGTTATGACTTCCACTGAACTGCTTTAGAAAAATGCACGAGCAAAACACATCAGTTTCCGATGCTGAGTTAATTTGTATTGGGATTTGAGgtaatcatttgtaaaaatgtattttgttggtTTATTCAAATAGCCATTTGGGAATTGTTTTGCGCAATATTCAAAATAACCCGTCAGTGGATTTTCATGACACGACTAATTGTTTGCTTGAAGAAACCTTCGAACATGATAATTAAATGGGACAACGATTAACTGAGGTTTGGTGTTTCTTCAATCAAACAATTAGTTGAAAATTCGGTGTTTAAGTGGTCAGAGTTGAACTTTTTGACAGTGTCTAAATGGTAGGTTTACTTCAGTTATGGTAGGTAACAATTAATTACCGTTTAGCTCTGAAGCATTGGTCATGGTGCGAGCTAATGAGTTTTGATGATCTATTGCTCGTTAGACCAATTTTGTCCTTTCTAATTATTTGTTCACAATCTAGATGGATATTTGCATGGGGTCTTGATTAGCAGACAAGGACGTGCATGTATGTAGTCAATATTTTATCACTTGACTTATTATTCTTAGGTCTATTGACAGACTGCCGAAAGAAATGGCACACATGGGACCACAGACTGCTTCATCTTTTGGATCTTGAATTTGACCACAACCTTTTAATTAAATGAGTCGAACGCTCattaaaaacaatacaaaatatcATGTCCAACTGCATCTTAGAAGTATTCCTACTTTTGATAATGCCAATATCTAATGGCTTCTGCATTGTAGATTTTCTTAGTTATCTATAGCCTAATATAATACAGGTGTTTACATTCATGTCAGCCTAACAGTTGACTTTTCTATCTTTTGGAAAGTACGAAAAATGACCCATCATCACACACCCTGATGACCCACGCCTCCTTTTATAAACTGAGCTAtatgactcgcctagttaaataaaggttcaatattaATATGTACTGCAATCCATTTCTCTCGCACGCCTGGGACTATAGGCCAACCCATGTGCATGTGCAACGTTATGTCTCCTAATTGTTTTAGGCCTAAGCATATGTATTTTGCGACAAGCAATGTATAGACGGTGCCAGACGCACGGCAGTGGGGTAAGCTATATTACAATACAGGGACCAGAGGGCACGGGAGTCTCATTGCAGGTGGTTGCCGTCGGGGACCGTTTTAGCCAGCCATGGGTTGGTCCTGGGCAGGAGGGCCATGATCGTTCAAAAGGTGCAGATGAAACGCGGATGCTGCTGGATGTGTGTGATGATGGGACGTCTGTGTGGCATATTTTACTATTTTCATATGATGTGGTCGTGCCTCGATATGGGATGGGGTGCTTGCCCTTGCAGGTACGGCAGTAACCCTCAAGACCCGGGTGGAGTGTCACAGACTCAACTCTGTTGCCATAAGCCTATGAGCTTTTTATTTTATCATTCACGATTTTAATATATATTATTCAATAGGAGTTATAATACCACATTAAAGAAAAATATTACTTTGGCCAATTAGCATAATGCGTCTTATGGACAGTTGATGTTACAAAATGTAAATGACATGCCTGCAGGGAGACAGAAATATTACATAAATATTACAGCTGAGCTAGAGGCTGACTGTGACCTTAAATCATCTCTGGCATTTCTAACACTCTGGCCCATTATTTTAATTGAGGACCCCAAACGAGCCCATTTTATTGCTTGAGGTccccattattagccagataatgatACTTTTGCGAAGAAAAAAACAAGTTATGCAGGCAAAAAATGGACCAGCCCTTCTGGCATTTGCCCGAAATGCCAGATGGCTAGTCTGCCCCTATGGGACACTGAACCACTAGCCTAGAATTCAGTCAGTCTGGGAGCTGAATGCCACTCGGACTAGAGggttattctctctcttttcGTAGCATAACAAAGTGTCCATTCATGTTACTCTCCCCAGGGAACTGGGCTCTGGCCTCCGAACACGTGACTCAAACAGACCAACCTGAGAGCGCGTGTGAAAATGAACCTGGCTGTGACAACAGCGCGAGCCACTCAACTGCCATTGACAGTTACAAGGCCTTCCCTTACAGCTGAATTCTGATAGACGATTGAAAATAATAGCTATTCCTGGGTATAGTTCGGAATACTTTTTATAGACTAAATTAAAATAGTGTAGGTTAATAAATACATACATTATTAATGTTTAAAATGAATGAAAGGGGTCCTATTTTAGCTCTTTGCAATTTTAGCTCTATGTTATTACTACACAGTAGGCCTATGTCTGTTACATTTCCACCTGGTTGAGGAAAGGACATATCCTTTTCGTAAGCCTATACCCTAGCAGAGGACTTTCCCCGCAGCTGAGAAAACATCTGCCTAAATTCTCCATATGAGTGCAATTTACCAAACCACATTCCCATCAAAACGCATAAGCCTTTGATCTCGCACCACCGGAGGGGGCCAACTAAGTCCTGTGAACAACCAACAGTGGTTGCTGGAAAACCCCGCAAGATGTCGCCATGGTCTTGACTTGCACCTTTTGTTGCTTGGGCCCAGAAGGATTGCTATTTTGTTCACAGGGTTTTAACCCTCATCAACGTTAAACCGAGACGCGCATGACCTGCATTTTCCAGATGTGCATTACATGTACACGGCCACTAGATAGAGCCCAAGTATCAAAAATACTTTATACATTTTTCAGTTCTTGGCCTGGGCCTGTTCCTAGTTGGATGGATTTCGTCATCATTACCGTTATTCGCCCTCCCCATCTCCTTCACCCCCACTCACCACCCAAACTATACTATCTGTGGCCGTTAGGCCTACCATTCGTTTTTATAGAACCAAGCCTATCATTACAAAATGCGATTTCAATTATCTGCATATATATACAAACAACATCGTAttattttgttcatttattttatGAGTTATTTACTTTTATAGGCCAATGTTTAGGGGTTGAATGTGCAAATATAAAGTGTTCGGAAAATACGTCTCAATACTAGCCTACATAAATAAAAGGCTTCTAAATAAGAAGTAATTGGCATTTGTCGGCATTTATTTCCCAGTTTCACGAAGGCTCCAATTATCCAGGTGTGGAAAAGTTGTGAGTCACGCAGTGCACTTGAAGGTAACAGATGGCTGGAGCCTGTACTGCGGATCGTCTTTTCACTGAACTAACCTAAAACAAAAGCTAAAAGAGATTGAACGCGTATTAAATCGTGTGGGAACGTAGGCCTAAATAATGCGATTTTATAAATGTAATTACGTTTTGGTCAACCTTTTTCGATTATTGGACCCACAGGCTATTCCGATTGATAGCCCATACCTACAATTTGCCACAAATAGCCTACATGTTGTTTTTTCCATTTTACACAACTTCTATCATTAAATGATGTCACGACAAATAAAAATTACCGCCTTTGAAACGGATTCGATTTACAAATCTTTGGGCTTGGTAATTACgccattgattgattgattgaatttaaGTTGTAAAATACATACATAAGCGCGCTCCAGCCAGTGACGCCTCCACATACAATGTAAGAAAATCATCAAGGATAACACAATTAAGCTTATtagcttatttccattgtggtccaaCGGTAATGATGACGAAATCCATTCCCGGTTGTATCAACCTTCATCatcctcacacatacacacatacaatagCGAGGACATCCATTTTCTACCAACgctgtcagggggctagggtgcACATGGCTAATCATACAACACAGCCGCAGCGTCAGTCACAGGCGTCCACAGATGTTGCTAAGAGAGCATCTCAGTGAGCTAGCAGAAGGATTGGAGCGGAACATTGGTGATGTTTTCTCACCAAGTTGATTTTGGATTCTATTTTTATTCCTATATTTGGTGGTTGCAATGTCGCCAACTCTAAGGCTGATTTTCATGTATGTACTGTTCCTCTGCTGTTTGTCTCCCTGCGCGGCAGACCTATGCAACTGGAGTGGAAGTGGTTTGGCGCGTGAGGCTGAGGCTAACTCGCGAACTGTGCAGCAGGTGCGGCTGCGTTGCACAGAGGGTTCGGTGGAGTGGGTCTACCCGGGCCAGGCGCTTCGGGTCGTCCTGGAACCCAACCTGTCCTCTGCGCGACACACAACGGTCTGCATCAAACCGTTCCGCAGCTTCAACGGTGCCAGCGTCTACATCGAGCGGGCTGGGGAACTTGACCTGTTGATGACGGATGGAGGGCGGCCGGAGCAGGTGTTCTGTTTCCCGGCGGACGGACCTCAGAAGCCAGCCATCTTCCTCCTGGCGAACCCGCAGAGGGATATCAGCCAACGCGCAGTAGGCTTCAGATATGAGTTGCTGGGCAATCGGACCACTGCGAACAACCTCGGCCAAAGTGTGTTGCAGGcTAGCTGCCGTCCCTGCAATGACACAGAGCTCCTCCTGGCCATCTGCAGCAGTGACTTTGTGGTTCGCGGCTCCATCAGGAACGTATCCCACAATGCTGAGCGGCAGACATCGTTGGTGGAGGTCTCAGAGGGGAGGGTGTACCGGCAGCGTAGCGGGGTGTTCGAGCGCCACACTGGCACCATAGGGGTTCCCGGTTCCAGTTCCTCATGGCACGGTCACATCCACACACTGTTACAGTGTCACATAAAGCCTGGGGGCGGAGAGTTCCTATTCACAGGGACAGAACACTTTGGGGAGGCCTGGCTGGGTTGTGCCCCCCGCTATAAAGACTTCATGTCCCTCTACCAATCAGCTTGGGCGGCTCGTCAGAACCCCTGTGAGTTCCCGCTGGACTGAGGGTGTGTCCCAGTTCCTAGTGGCGATCCATGAGCCCTGTGACCTATATGTAGGGTTTATTTTCTTAAATGGAACACATTGAGTCTCTTCTTTCTACCCCAGTTGGCATGGTAGAGATTATGTCGCCGTGGCAGCAAGCGAGCGAGATGAGTTCCTCACGACCACAGCGGTTTGAGAGATGTTGTCCCTTCTACTCCTCATGAATCTATACCACTCCAAACACCAGCAGGGACAAATCTGTTGGAGCACTTGTAGAGCACAAGGAGTACAAGGCCCAGGGCAGGGGCCCACAGGGGACCCATCCAGCCAGCACTAGAGGGGCCACCACAGCCCCTGCCGGCCCCAGCGGGGAAAGACTTAGAGAGCCTGgccctttgtctgtctctcttctcaaCGCCCACAGCTCCCAGAGACTAAAAATGGTTTGACTGCTGCTTCACGCTTTCTCTCCCCACACCAACTGCTGCTtcactctttgtctctccccACACCAACGGCTGCTtcactctttgtctctccccACACCAACGGCTGCTtcactctttgtctctccccACACCAACTGCTGCTTCACGCTTTGTCTCTCCCCACACCAACTGCTGCTtcactctttgtctctccccACACCAACTGCTGCTtcactctttgtctctccccACACCAACTGCTGCTTTACTCTTTGTCTCTCCCCACACCAACTGCTGCTtcactctttgtctctccccACACCAACTGCTGCTtcactctttgtctctccccACACCAACTGCTGCTtcactctttgtctctccccACACCAACTGCTGCTtcactctttgtctctccccACACCAACTGCTGCTtcactctttgtctctccccACACCAACTGCTGCTtcactctttgtctctccccACACCAACTGCTGCTtcactctttgtctctccccACACCAACGGCTGCTtcactctttgtctctccccACACCAACTGCTGCTTCACGCTTTGTCTCTCCCCACACCAACTGCTGCTtcactctttgtctctccccACACCAACTGCTGCTtcactctttgtctctccccACACCAACTGCtgcttcactctttctctctccccacacaaACTGCTGCTCTCTTCAGAGGACACCTCTCACAGGTGTCCTCTGAACTACTGTGGCAGGAAATCCTATGAATTTAATGTCTGATTGTTAGGTTTTATGTGGTCTTGTTTATTCCTTTGTACAATAGGTTTTGAAATATTTTATTGTAATGTAAATGAAGTGTTTTGTAAATTCACAAGGATTTGCTTATTTACATATTGATTGTATCATTTTGGTTTTATTACAGGGTATGGATGATGCTACAGTGTAGGTGCAAACCTTCAGTTTGATTACCATTTATTGCCAAAATATATAAGCAATGCTTGTGGGGATTTCTTGTGTACTTTTTTGATTGACTTGCAATGCACTTTCAAGCAATTACTCAAACTTTTGAACAAGAGATTTATATTATTCTTCATAACATTCTTTATTATGGTTCTTGAGCATTATGGGAAAATATTTGTTGAAAATAGCTCCTCCTGTAGGAAATAATGATCATGAATGTTTGCATTGCAATTTTCTGCAACACATTTAAATGACAAAAACATCTATTGCACTATTGTATCTAttgtctattaaaataatacTGTTAAATATG

Function

NR:

description
meteorin-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941539.1 True 6674 mRNA 0.45 4 54720661 54731365

Neighbor

gene id symbol gene type direction distance location
LOC110486816 LOC106606673 coding upstream 359 54717610 ~ 54720302 (+)
LOC110486813 LOC106606687 coding upstream 10104 54701105 ~ 54710557 (+)
LOC118938094 NA coding upstream 64798 54655147 ~ 54655863 (+)
LOC110515422 LOC106606686 coding upstream 80919 54614037 ~ 54639742 (+)
LOC118938328 LOC106601771 coding upstream 107225 54599341 ~ 54613436 (+)
LOC110485227 LOC106606653 coding downstream 24517 54755882 ~ 54810128 (+)
LOC110486830 LOC106606695 coding downstream 176203 54907568 ~ 54925441 (+)
narfl LOC106606697 coding downstream 194202 54925567 ~ 54933422 (+)
LOC110486846 LOC106601652 coding downstream 207655 54939020 ~ 54940491 (+)
LOC110539040 LOC106601832 coding downstream 609337 55340702 ~ 55394765 (+)
G1187587 NA non-coding upstream 39158 54681285 ~ 54681503 (+)
G1187586 NA non-coding upstream 46175 54674283 ~ 54674486 (+)
G1187585 NA non-coding upstream 47688 54672559 ~ 54672973 (+)
G1187584 NA non-coding upstream 58347 54661825 ~ 54662314 (+)
G1187583 NA non-coding upstream 60096 54660285 ~ 54660565 (+)
G1187597 NA non-coding downstream 1727 54733092 ~ 54733593 (+)
G1187598 NA non-coding downstream 3682 54735047 ~ 54735375 (+)
G1187601 aqp8 non-coding downstream 7854 54739219 ~ 54742448 (+)
G1187614 NA non-coding downstream 30751 54762116 ~ 54762918 (+)
G1187618 NA non-coding downstream 35117 54766482 ~ 54767157 (+)
axin2 LOC105026129 other upstream 420348 54272638 ~ 54300365 (+)
G1187390 NA other upstream 455633 54264066 ~ 54265028 (+)
G1187452 NA other upstream 522646 54188567 ~ 54198015 (+)
LOC110538743 LOC106601732 other upstream 1270197 53445335 ~ 53450473 (+)
LOC110539012 LOC106606743 other upstream 1697680 52907896 ~ 53046938 (+)
G1188344 NA other downstream 262309 54993674 ~ 54997295 (+)
G1188386 NA other downstream 389896 55121261 ~ 55122619 (+)
G1189040 NA other downstream 1207107 55938472 ~ 55939357 (+)
G1189738 NA other downstream 2105051 56836416 ~ 56836996 (+)

Expression


Co-expression Network