LOC118938095 (LOC106601785)


Basic Information

Item Value
gene id LOC118938095
gene name LOC106601785
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 54889605 ~ 54890333 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939770.1
GGTTATCAGACCCTGCTTTGGATCCCTGGTCCAGAGGCAGGTCTGACTGTGGTCTTACCTGGGTCTCCACCAGTGTATTTGGGGAAACCTGGATTCTTATTATAGTCCCTGAATTCCTGCCACGCCTCCTACTGGTGTAAAAACAAATAAGGACCCATGATGTTTTACCATTCTACCACAGCAGGAGGCGTGCATGTGACTGGGTCTGTAATCTGGTATATTTGGGGATAGTATTTGAGAAAGGCATGGACTCTAGACCCTGGTAATAGCAGTGTTTGTGTTAGAAgtatcctggtcccagatctgtttgtgctcttgtcaACTACATTGCTGTCATTGCCAAGTCAAACATGTTCCATGAGGAGTTGTCAAgacagcagaaacagactggcacccaggctatgtATAACAGGCTTAAGTAACCAACCCAATCCTGACTACTCTCCAGACCTGACCCTCCCGGCTACCAATCAGAACTGGCCGGAGGAGTTTGGGTTCACTCTGGGGGGCGCGGGCCCCAGCTACATCCTGTCTGTGATTGAGGGCAGCAGTGCCTACCTGGCGGGCCTGCAGCCTGGGGACCAGGTGGTGGACATCGAGGGCCAGGAGGTGTCCTCTCTCAGCACCCAGGCCCTGGTGGCCCTGGCACAGACTCTGAAGACTGTACCCCCCAGCATCGGAGTGGTGTCACGCATAGAACAGGTCTGGAACAGTTGGGAAATCATTTAG

Function

NR:

description
PREDICTED: delphilin-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939770.1 True 729 mRNA 0.53 1 54889605 54890333

Neighbor

gene id symbol gene type direction distance location
LOC110486827 LOC106606694 coding downstream 160 54809618 ~ 54889445 (-)
trnaa-ugc-61 NA coding downstream 33995 54855535 ~ 54855610 (-)
LOC110485228 LOC106606689 coding downstream 58253 54813122 ~ 54831352 (-)
LOC110486825 LOC106606691 coding downstream 140896 54741479 ~ 54748709 (-)
LOC118938329 aqp8 coding downstream 148882 54736714 ~ 54740723 (-)
LOC110486831 e4f1 coding upstream 4733 54895066 ~ 54907473 (-)
LOC110486844 LOC106606699 coding upstream 42833 54933166 ~ 54938835 (-)
LOC110485232 LOC106606700 coding upstream 56028 54946361 ~ 54975807 (-)
LOC118938330 LOC106601777 coding upstream 113627 55003960 ~ 55011294 (-)
LOC110486834 LOC106601778 coding upstream 123522 55013855 ~ 55016528 (-)
G1188281 NA non-coding downstream 15607 54868567 ~ 54873998 (-)
G1188275 NA non-coding downstream 35129 54854105 ~ 54854476 (-)
G1188270 NA non-coding downstream 41299 54845460 ~ 54848306 (-)
G1188311 LOC106606697 non-coding upstream 41391 54931724 ~ 54974451 (-)
G1188327 NA non-coding upstream 85863 54976196 ~ 54976771 (-)
G1188342 NA non-coding upstream 102193 54992526 ~ 54992792 (-)
G1188399 NA non-coding upstream 109200 54999533 ~ 55002316 (-)
G1188402 NA non-coding upstream 122613 55012946 ~ 55013237 (-)
G1188186 LOC106588841 other downstream 289156 54599401 ~ 54600449 (-)
G1188127 LOC106601757 other downstream 418767 54409911 ~ 54470838 (-)
G1188147 NA other downstream 439585 54448883 ~ 54450020 (-)
LOC110486836 LOC106606701 other upstream 132315 55022619 ~ 55026465 (-)
LOC110516592 LOC106601772 other upstream 321166 55209614 ~ 55242150 (-)
LOC110485238 LOC106601829 other upstream 544483 55434816 ~ 55509918 (-)
G1189279 LOC106601786 other upstream 1021891 55912224 ~ 55915885 (-)
LOC110485237 LOC106606659 other upstream 1217611 56088292 ~ 56110984 (-)

Expression


Co-expression Network