narfl (LOC106606697)


Basic Information

Item Value
gene id narfl
gene name LOC106606697
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 54925567 ~ 54933422 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941557.1
AACACAAACTGCTTTACAGCAGCACTAAACATGGTGTCCCAATTTAGCGGTGTTTTGCAATTGACAGATCTAGATGATTTTATCACTCCTTCCCAGGAATGTGTGAAACCAGTCAAGGTGGAGAAGAAGCAAGGCCGATCTGTGGCTAAAATTCAAATAGAAGATGATGGGAGCTATTTCCAGGTTAAACAGGATGGTGGAAAGCAGAAGCTGGAGAAAGCTAAGATCACTCTGAATGACTGCCTGGCCTGCAGTGGCTGCATCACCTCAGCTGAGAGTGTCCTTATCACACAGCAGAGTCATGAAGAGATTTACAGGGTGCTACGCAGCAACaagCAGGCAGGTGTAGCAGAGcagaaggtggtggtggtgtctgtgtCCCCACAGTCCAGAGCCTCCCTGGCAGCACGCTACGGCCTGAGCAGCAGTGATGCAGGCAGGAGGCTCACCGCCTTCTTCAAGGGTCTGGGAGTTCACCACGTGTTTGACACCAGCTTCAGCAGGACCTTCAGCCTGttggagagtcagagagagtttGTGGAGCGGTTCCATCGGAAGGAGCAAGACAAGCAGGCCCTGCCCATGCTGGCCTCTGCCTGCCCAGgttGGATCTGCTATGCAGAGAAAACCCATGGAGAGTTCATCCTGCCCTACATCAGCTCCACCCGCTCCCCACAGCAGATGATGGGCTCTCTGGTGAAGGGCTTCTTCGCTGGCCAGCAGggcCTGAACCCACAGCAGATCTACCATGTGACTGTGATGCCCTGCTATGATAAAAAACTGGAGGCCTCCAGGCCTGACTTCTACCTGGAGGAGGCTGACACCAGAGAGGTGGACTGTGTCATCACTTCAGGAGAGGTTCTGAAGATGCTAGAAGAAGAGAAAGTGTTGCTCAGTGATGTGGAGCCAGCCCCATTAGATACAATgttcagcagtgtgtgtggtgatgAGTTGCTGGGCCATGCAGGGAGCGGTTCAGGAGGATACCTCCATCACGTGTTCACACACGCTGCCAGACAGCTGTTtggagaggaggtgaaggagcTCACCTACAAGACACTCAAGAACAAGGACTTCCAGGAGGTGACCCTGGAAAGGGACGGTGTGGTCGTGCTGCGTTTCGCCACAACCTACGGTTTCCGCAACATCCAGAACCTGGTGCAGAAACTCAAGAGGGGAAAGTCACCCTACCACTTCGTAGAGGTCATGGCCTGTCCGTCAGgTTGTCTGAATGGGGGAGGCCAGGTGAAGCCCTTACCAGAGCAGAACAACAAGGAGTTGCTGCAGCAGGTGGAGGATCTGTACAAGGAGGAGCGCCCTCTAGTGCCAGAGGAGGACCAGCACGTGGCAGAGCTTTACCAGTCCTGGCTACAGagtgtaggagaggagagagccaggGAGCTGCTGCACACACAGTACCATGCAGTGGACAAGGCCACCAACGGACTCCTTGTCAAATGGTGAAGAAGAGGGTGAAAGGATGTTGAAGGGTTTCTGTaagtgaatggtctgtcctcaaGTGTCAGGGTGCATCTCAAGTGTCTAAAGTAGCCCTCTCTGTTTCATCTCCATTGAGTTTAACACAGGTTAGGTGGAAGCAACATGGCCGGTTCTTGTTGGGTATTTTCTGTCACCTGTCTTAGTTCTTTAATAtcagtagaaataaagaaaaaggcATGATGCACATACATTTTGTCTATTGAGATGCATCCCTATTCTAGGATTATTTGAACCATTTGAGTGAAATCACACAACTTGACCTTGGGTTAATGTTTATGCTCCATCTGTACTGGATGACTGAATTTAGCACTTTCCTTCAccgtctctttgtctctctcctctaccgtCTCTTTGTCTTTGCGGCTCtcttttcaagttttctactccgctagccagcacctagcCAGCACcttgcctaaataggtgtgcgttaaTTTTTCTTCTAGATCTGTCATTTATTTATACCAATATAAAGCCTGTATACATTCAGGCTATAGATTGTATACGCACAAGCTAATTCATACCAGACCACTGGTATGGTTGGGATAATTATTACTACATTTAAGTGTGCACTAATTATGAATACAGCAGCAAATTCTGTTATTTCTCTTGTATGCACTGAAAAGGATTTGGACTCTTGAAATGTTTTCTGATGGAATTCTAAAGAAATATTTTAGTTTAAATGAATATCATTTCTGCCTTATTTATAATAAATCTATGATACATATTTTGCATATTAAAATGTTAGTGTAACTTTCAAGTACGTTATTCACCATGCACCAGCAGTCATTGATATACATACTGACACGATACTGAGGAACCGTTTTAGCTGTAGAAATAAGCATACACTTTCAATATTTACATTCATGTTTTCAGTGTTTTCTTCCTTTGTATGGCATGGTGAGAACAAGAGGCACATACCTTCATACGGTATGCTGTCAGTTAAGCAGCTAGGTTCAACCATTTAATATGGACTAAGTAATATTAGCAATGTCAAAATATATTGCTTATATATTAAACTAAATGTTTAGCAGCTATTTTGTTATAGATATGTGGTGAAATGTTAATACAGAATGTCAAGCAAACATCACCGTTTTACCCTAAGAATTCTGCAAGCGGGTAATAGTCATTAGGGATATGAATCTCTCACAAATATGAAATTAATTGTTAGGTCAACAATAGAAACAATCTGCTTTATTGCTTTTTCTGTGAAGGAGACAATGGAGCTTTTAGTAAAACCTATGTATCACGAACTTCCCATTGGCACTCAAAGCctgatatgtgtgtatgtatatatatatatatatatatatatggagctTTTGATTAACAAAGAGCATAAGTTGTCTTATTTTCTATAGTATGAGAGATGTTTGGAAGCGCTTCAGTCTTGATTTTCTAAATGTCCAGCAATCACACTAAAG
>XM_036941558.1
AACACAAACTGCTTTACAGCAGCACTAAACATGGTGTCCCAATTTAGCGGTGTTTTGCAATTGACAGATCTAGATGATTTTATCACTCCTTCCCAGGAATGTGTGAAACCAGTCAAGGTGGAGAAGAAGCAAGGCCGATCTGTGGCTAAAATTCAAATAGAAGATGATGGGAGCTATTTCCAGGTTAAACAGGATGGTGGAAAGCAGAAGCTGGAGAAAGCTAAGATCACTCTGAATGACTGCCTGGCCTGCAGTGGCTGCATCACCTCAGCTGAGAGTGTCCTTATCACACAGCAGAGTCATGAAGAGATTTACAGGGTGCTACGCAGCAACaagGCAGGTGTAGCAGAGcagaaggtggtggtggtgtctgtgtCCCCACAGTCCAGAGCCTCCCTGGCAGCACGCTACGGCCTGAGCAGCAGTGATGCAGGCAGGAGGCTCACCGCCTTCTTCAAGGGTCTGGGAGTTCACCACGTGTTTGACACCAGCTTCAGCAGGACCTTCAGCCTGttggagagtcagagagagtttGTGGAGCGGTTCCATCGGAAGGAGCAAGACAAGCAGGCCCTGCCCATGCTGGCCTCTGCCTGCCCAGgttGGATCTGCTATGCAGAGAAAACCCATGGAGAGTTCATCCTGCCCTACATCAGCTCCACCCGCTCCCCACAGCAGATGATGGGCTCTCTGGTGAAGGGCTTCTTCGCTGGCCAGCAGggcCTGAACCCACAGCAGATCTACCATGTGACTGTGATGCCCTGCTATGATAAAAAACTGGAGGCCTCCAGGCCTGACTTCTACCTGGAGGAGGCTGACACCAGAGAGGTGGACTGTGTCATCACTTCAGGAGAGGTTCTGAAGATGCTAGAAGAAGAGAAAGTGTTGCTCAGTGATGTGGAGCCAGCCCCATTAGATACAATgttcagcagtgtgtgtggtgatgAGTTGCTGGGCCATGCAGGGAGCGGTTCAGGAGGATACCTCCATCACGTGTTCACACACGCTGCCAGACAGCTGTTtggagaggaggtgaaggagcTCACCTACAAGACACTCAAGAACAAGGACTTCCAGGAGGTGACCCTGGAAAGGGACGGTGTGGTCGTGCTGCGTTTCGCCACAACCTACGGTTTCCGCAACATCCAGAACCTGGTGCAGAAACTCAAGAGGGGAAAGTCACCCTACCACTTCGTAGAGGTCATGGCCTGTCCGTCAGgTTGTCTGAATGGGGGAGGCCAGGTGAAGCCCTTACCAGAGCAGAACAACAAGGAGTTGCTGCAGCAGGTGGAGGATCTGTACAAGGAGGAGCGCCCTCTAGTGCCAGAGGAGGACCAGCACGTGGCAGAGCTTTACCAGTCCTGGCTACAGagtgtaggagaggagagagccaggGAGCTGCTGCACACACAGTACCATGCAGTGGACAAGGCCACCAACGGACTCCTTGTCAAATGGTGAAGAAGAGGGTGAAAGGATGTTGAAGGGTTTCTGTaagtgaatggtctgtcctcaaGTGTCAGGGTGCATCTCAAGTGTCTAAAGTAGCCCTCTCTGTTTCATCTCCATTGAGTTTAACACAGGTTAGGTGGAAGCAACATGGCCGGTTCTTGTTGGGTATTTTCTGTCACCTGTCTTAGTTCTTTAATAtcagtagaaataaagaaaaaggcATGATGCACATACATTTTGTCTATTGAGATGCATCCCTATTCTAGGATTATTTGAACCATTTGAGTGAAATCACACAACTTGACCTTGGGTTAATGTTTATGCTCCATCTGTACTGGATGACTGAATTTAGCACTTTCCTTCAccgtctctttgtctctctcctctaccgtCTCTTTGTCTTTGCGGCTCtcttttcaagttttctactccgctagccagcacctagcCAGCACcttgcctaaataggtgtgcgttaaTTTTTCTTCTAGATCTGTCATTTATTTATACCAATATAAAGCCTGTATACATTCAGGCTATAGATTGTATACGCACAAGCTAATTCATACCAGACCACTGGTATGGTTGGGATAATTATTACTACATTTAAGTGTGCACTAATTATGAATACAGCAGCAAATTCTGTTATTTCTCTTGTATGCACTGAAAAGGATTTGGACTCTTGAAATGTTTTCTGATGGAATTCTAAAGAAATATTTTAGTTTAAATGAATATCATTTCTGCCTTATTTATAATAAATCTATGATACATATTTTGCATATTAAAATGTTAGTGTAACTTTCAAGTACGTTATTCACCATGCACCAGCAGTCATTGATATACATACTGACACGATACTGAGGAACCGTTTTAGCTGTAGAAATAAGCATACACTTTCAATATTTACATTCATGTTTTCAGTGTTTTCTTCCTTTGTATGGCATGGTGAGAACAAGAGGCACATACCTTCATACGGTATGCTGTCAGTTAAGCAGCTAGGTTCAACCATTTAATATGGACTAAGTAATATTAGCAATGTCAAAATATATTGCTTATATATTAAACTAAATGTTTAGCAGCTATTTTGTTATAGATATGTGGTGAAATGTTAATACAGAATGTCAAGCAAACATCACCGTTTTACCCTAAGAATTCTGCAAGCGGGTAATAGTCATTAGGGATATGAATCTCTCACAAATATGAAATTAATTGTTAGGTCAACAATAGAAACAATCTGCTTTATTGCTTTTTCTGTGAAGGAGACAATGGAGCTTTTAGTAAAACCTATGTATCACGAACTTCCCATTGGCACTCAAAGCctgatatgtgtgtatgtatatatatatatatatatatatatggagctTTTGATTAACAAAGAGCATAAGTTGTCTTATTTTCTATAGTATGAGAGATGTTTGGAAGCGCTTCAGTCTTGATTTTCTAAATGTCCAGCAATCACACTAAAG

Function

NR:

description
cytosolic Fe-S cluster assembly factor NARFL isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941557.1 False 2924 mRNA 0.45 11 54925567 54933422
XM_036941558.1 True 2921 mRNA 0.45 11 54925567 54933422

Neighbor

gene id symbol gene type direction distance location
LOC110486830 LOC106606695 coding upstream 126 54907568 ~ 54925441 (+)
LOC110485227 LOC106606653 coding upstream 115439 54755882 ~ 54810128 (+)
LOC110486811 LOC106601768 coding upstream 194202 54720661 ~ 54731365 (+)
LOC110486816 LOC106606673 coding upstream 205265 54717610 ~ 54720302 (+)
LOC110486813 LOC106606687 coding upstream 215010 54701105 ~ 54710557 (+)
LOC110486846 LOC106601652 coding downstream 5598 54939020 ~ 54940491 (+)
LOC110539040 LOC106601832 coding downstream 407280 55340702 ~ 55394765 (+)
LOC110538788 bri3 coding downstream 491443 55424865 ~ 56123584 (+)
LOC110538766 LOC105013005 coding downstream 900689 55834111 ~ 55915904 (+)
LOC110485236 LOC106606588 coding downstream 1102218 56035640 ~ 56088193 (+)
G1187645 NA non-coding upstream 90184 54833998 ~ 54835383 (+)
G1187638 NA non-coding upstream 98609 54826415 ~ 54826958 (+)
G1187626 NA non-coding upstream 144615 54780633 ~ 54780952 (+)
G1187618 NA non-coding upstream 158410 54766482 ~ 54767157 (+)
G1188328 NA non-coding downstream 46197 54979619 ~ 54979889 (+)
G1188331 NA non-coding downstream 48810 54982232 ~ 54982474 (+)
G1188334 NA non-coding downstream 51044 54984466 ~ 54984780 (+)
G1188343 NA non-coding downstream 67062 55000484 ~ 55002271 (+)
G1188347 LOC106601778 non-coding downstream 80446 55013868 ~ 55016506 (+)
axin2 LOC105026129 other upstream 625254 54272638 ~ 54300365 (+)
G1187390 NA other upstream 660539 54264066 ~ 54265028 (+)
G1187452 NA other upstream 727552 54188567 ~ 54198015 (+)
LOC110538743 LOC106601732 other upstream 1475103 53445335 ~ 53450473 (+)
LOC110539012 LOC106606743 other upstream 1902586 52907896 ~ 53046938 (+)
G1188344 NA other downstream 60252 54993674 ~ 54997295 (+)
G1188386 NA other downstream 187839 55121261 ~ 55122619 (+)
G1189040 NA other downstream 1005050 55938472 ~ 55939357 (+)
G1189738 NA other downstream 1902994 56836416 ~ 56836996 (+)

Expression


Co-expression Network