aimp2 (aimp2)


Basic Information

Item Value
gene id aimp2
gene name aimp2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 55289150 ~ 55293431 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941567.1
TGACGTAAGACACTGAGTCGGGCATCCTTCCTTTCGGTCGCAGGCTGCACGTAGCTGCAGCGGTCTGATAAGTAACGTCCCCAGAAGTCAGCTGTTGCTGGAATATCGGTTGTTATTGGTTCTTTTGGAGGGCACTAACCACCCAACAATATGCCCATGTACCAGAATGGGACAGAGGTGGACCCTGCGTTCAGAGACCTGGAGGTACGTCAGGATAAGATCATGCGCAGGCTCTATGAATTGAAGGCAGCCGTGGATGGCCTGGCCAAGACCGTGACCACACCCGACGCTGACCTGGACCAGACTGTGACCTCTCTctcccagagtcccacagccacATCCTTTAGAGGTACTGCAGACCTGGACTCCCTACTGGGCAAGGACCTTGGTGCCCTCCGGGACATTGTGATCAACGCCAATCCAGCACGACCACCCCTCACCCTGCTGGTGCTCCACGCAATGCTGTGCCAGCGCTACCGGGTGCTCTCCAGTGTGCATGTCCACTCATCAGTGTCCGGTGTGCCCGCGCAGCTGCTCGCCTGCCTGGGGCCGCGCCACGCAGACAGCTACGTCCGCCAGCGTTTCCAGCTGGGCTTCACCCTTATATGGAAAGATGtCTCCAAGCTGCAGATGAAGTTCAGCATTCAGAACATGTGCCCCATCGAGGGCGAGGCCAACGTGGCGCGCTTCTTGTTCCGCCTCGTTGCCCCTTACCCCAGCGACCCCGCCCTGGCTACACTGGTGGACAGTTGGGTGGACACAGCCTTCTTCCAGCTCGCTGAGGGCAGCGCTAAGGAGCGGTCGGCAGTCCTCCGCGCCCTCAACGGCGCTTTGGGTCGCGACCCCTGGCTGGCCGGTCCCGAGCTCTCGCTGGCTGACATCGCCTGTTACTGCTGCGTCCTCCAGACAGGCCCTGCCGCCTCCTGTCCTGCCAACGTCCAGCGCTGGCTTAAAGCGTGTGAGAACCTGGGCCACTTTGGCCCCGCCAACCCTCTACTGCAGTGACCACAGCTGCCTAGCAGATCTCAGGGTGCTTCAATGGAGTAGGTAGAAGATACCCACTAGTCATTGATCCAGAGTCAGATATTGCCCCAGTCCCCTTGTTGGGAATAGAGGTTTTGGGGTGAAGTAGTAGTCTGACCCTAGATCTGTGTACGGGTGACTTCTAGCTGGAGCGCCACCAGGGCCCAGCCTATGGGGTTTAACTGTATCTCTGCACTGTGCTCAGAACGAAAAGGGAATAATTGAATACACCTGTCACATCCCAATACTCTAGAAATGCTCCCTTACTCCCTTACTTGTGTATCTAAGCTTTGCAATGACTGAACAGATATAGATAGCTGTAAACACAGTTCTCCCTCCCTCGTGCCTAACAAGATGATCTACacagatgggtgtgtgtgtgggggcgtaGTAATGGGGTGTGACTTGCTGTTTAACTAAAGAAGCGGTTGAAAAATGTGACGCAACAGGACCTACTGATGTGGTATCTACAGTATGAAAAGTAAAACTTTGTAGCGTTTTTGTTCTTAAATCACTAAAATGTCCACTTTGGATCAAACTTTGAA
>XM_036941566.1
TTCACCGGATGTGACGTAAGACACTGAGTCGGGCATCCTTCCTTTCGGTCGCAGGCTGCACGTAGCTGCAGCGGTCTGATAAGTAACGTCCCCAGAAGTCAGCTGTTGCTGGAATATCGGTTGTTATTGGTTCTTTTGGAGGGCACTAACCACCCAACAATATGCCCATGTACCAGGTAAAGCCCGTCTTTGGGGATGACATAAAGACTGATTTGCCAACCTGCATGTACAAGTTGCCGAATATCCACGCGCAGAGAAGTGCAAGTGGCTGCTCGGAACATGCGCTTCAGAATGGGACAGAGGTGGACCCTGCGTTCAGAGACCTGGAGGTACGTCAGGATAAGATCATGCGCAGGCTCTATGAATTGAAGGCAGCCGTGGATGGCCTGGCCAAGACCGTGACCACACCCGACGCTGACCTGGACCAGACTGTGACCTCTCTctcccagagtcccacagccacATCCTTTAGAGGTACTGCAGACCTGGACTCCCTACTGGGCAAGGACCTTGGTGCCCTCCGGGACATTGTGATCAACGCCAATCCAGCACGACCACCCCTCACCCTGCTGGTGCTCCACGCAATGCTGTGCCAGCGCTACCGGGTGCTCTCCAGTGTGCATGTCCACTCATCAGTGTCCGGTGTGCCCGCGCAGCTGCTCGCCTGCCTGGGGCCGCGCCACGCAGACAGCTACGTCCGCCAGCGTTTCCAGCTGGGCTTCACCCTTATATGGAAAGATGtCTCCAAGCTGCAGATGAAGTTCAGCATTCAGAACATGTGCCCCATCGAGGGCGAGGCCAACGTGGCGCGCTTCTTGTTCCGCCTCGTTGCCCCTTACCCCAGCGACCCCGCCCTGGCTACACTGGTGGACAGTTGGGTGGACACAGCCTTCTTCCAGCTCGCTGAGGGCAGCGCTAAGGAGCGGTCGGCAGTCCTCCGCGCCCTCAACGGCGCTTTGGGTCGCGACCCCTGGCTGGCCGGTCCCGAGCTCTCGCTGGCTGACATCGCCTGTTACTGCTGCGTCCTCCAGACAGGCCCTGCCGCCTCCTGTCCTGCCAACGTCCAGCGCTGGCTTAAAGCGTGTGAGAACCTGGGCCACTTTGGCCCCGCCAACCCTCTACTGCAGTGACCACAGCTGCCTAGCAGATCTCAGGGTGCTTCAATGGAGTAGGTAGAAGATACCCACTAGTCATTGATCCAGAGTCAGATATTGCCCCAGTCCCCTTGTTGGGAATAGAGGTTTTGGGGTGAAGTAGTAGTCTGACCCTAGATCTGTGTACGGGTGACTTCTAGCTGGAGCGCCACCAGGGCCCAGCCTATGGGGTTTAACTGTATCTCTGCACTGTGCTCAGAACGAAAAGGGAATAATTGAATACACCTGTCACATCCCAATACTCTAGAAATGCTCCCTTACTCCCTTACTTGTGTATCTAAGCTTTGCAATGACTGAACAGATATAGATAGCTGTAAACACAGTTCTCCCTCCCTCGTGCCTAACAAGATGATCTACacagatgggtgtgtgtgtgggggcgtaGTAATGGGGTGTGACTTGCTGTTTAACTAAAGAAGCGGTTGAAAAATGTGACGCAACAGGACCTACTGATGTGGTATCTACAGTATGAAAAGTAAAACTTTGTAGCGTTTTTGTTCTTAAATCACTAAAATGTCCACTTTGGATCAAACTTTGAA

Function

symbol description
aimp2 Predicted to be involved in positive regulation of aminoacyl-tRNA ligase activity. Predicted to act upstream of or within apoptotic process and cell differentiation. Predicted to be located in cytosol and nucleus. Predicted to be part of aminoacyl-tRNA synthetase multienzyme complex. Is expressed in several structures, including alar plate midbrain region; head; immature eye; midbrain; and musculature system. Human ortholog(s) of this gene implicated in hypomyelinating leukodystrophy. Orthologous to human AIMP2 (aminoacyl tRNA synthetase complex interacting multifunctional protein 2).

NR:

description
LOW QUALITY PROTEIN: aminoacyl tRNA synthase complex-interacting multifunctional protein 2

GO: NA

KEGG:

id description
K15438 AIMP2; aminoacyl tRNA synthase complex-interacting multifunctional protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941567.1 False 1568 mRNA 0.55 4 55289150 55293420
XM_036941566.1 True 1693 mRNA 0.55 4 55289150 55293431

Neighbor

gene id symbol gene type direction distance location
LOC110486847 LOC106606650 coding downstream 12479 55254697 ~ 55276671 (-)
LOC110516592 LOC106601772 coding downstream 47000 55209614 ~ 55242150 (-)
LOC110514491 LOC106606702 coding downstream 129961 55029537 ~ 55159189 (-)
LOC110486836 LOC106606701 coding downstream 262685 55022619 ~ 55026465 (-)
LOC110486834 LOC106601778 coding downstream 272622 55013855 ~ 55016528 (-)
LOC110486849 LOC106601824 coding upstream 18859 55312290 ~ 55316734 (-)
pvalb1 pvalb1 coding upstream 28168 55321599 ~ 55324310 (-)
LOC118936431 LOC106601789 coding upstream 41028 55334459 ~ 55341851 (-)
LOC110519575 LOC106606659 coding upstream 101433 55394864 ~ 55419061 (-)
LOC110485238 LOC106601829 coding upstream 141705 55434816 ~ 55509918 (-)
G1188669 NA non-coding downstream 936 55284446 ~ 55288214 (-)
G1188638 NA non-coding downstream 34668 55243545 ~ 55254482 (-)
G1188632 NA non-coding downstream 81952 55205846 ~ 55207198 (-)
G1188490 NA non-coding downstream 88799 55199094 ~ 55200351 (-)
G1188675 NA non-coding upstream 11206 55304637 ~ 55304886 (-)
G1188693 NA non-coding upstream 33642 55327073 ~ 55327354 (-)
G1188696 NA non-coding upstream 46342 55339773 ~ 55340366 (-)
G1188717 NA non-coding upstream 78768 55372199 ~ 55372529 (-)
G1188682 NA non-coding upstream 136303 55429734 ~ 55432178 (-)
LOC110485228 LOC106606689 other downstream 457828 54813122 ~ 54831352 (-)
LOC110486825 LOC106606691 other downstream 540492 54741479 ~ 54748709 (-)
G1188186 LOC106588841 other downstream 688701 54599401 ~ 54600449 (-)
G1189279 LOC106601786 other upstream 618793 55912224 ~ 55915885 (-)
LOC110485237 LOC106606659 other upstream 814513 56088292 ~ 56110984 (-)
G1189660 LOC106601786 other upstream 1376862 56670293 ~ 56674238 (-)
LOC110486894 LOC106601810 other upstream 1787386 57054453 ~ 57085521 (-)

Expression


Co-expression Network