nduba (LOC106601814)


Basic Information

Item Value
gene id nduba
gene name LOC106601814
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 57094312 ~ 57099778 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001160603.2
GAAGAGGTCGAATTCAATAAGTTTATTTTTGTTCTTTAACAAAAGACAGCAAAATGCCATCGGACTATGATAAAGATGCGTATCCAGAGCCTCCCCGCCAGACTCCCATCGTGGACAAGCAGACGACCCTTCCCAACCCAGCCCTGATTTTGACTAAACTCTTCTATTATTCCGTGGACCTCCCTGTCACCACATTCAgagAACTTGTGGAGGGTATCCACTCTGGCAACAAGTACAACTACTACCACCAGAAGTTCCGCCGTGTCCCAGAGCTGACCGAGTGCACAGAGGGAGACTACACCTGTTACTATGAGGCTGAGATGCAGTGGAGGAGAGATCATAAGGTGGACCAGGAGATTGTGAAGGTGGTCCAGGAGCGTCTGAGGGCCTGCCAGCAGAGGGAGGGTACCAGCTACCATCAGAACTGTTCCAAGGAGCTGCAGCAGTTTGCAGACGTGGCCAAGGCCTACCAGTCACGCTATGGGGATCTGGGAGCCTACGCCAGCTCAAGGAAATGTCTGATGAAGCAGAAAGACAGGATGATGGCGGCCGAGGCAAAAGCTTAAACAATATAACCCCTATGTTCCAAGTCTCTCTCCTATGTATGAAATGTAGAGTAAATGTTTATTGCGAAAAAATAATTGTCCTCATTGTATTGTTTAGCTGTAGTAACAGACAACTTTTTTGAATGAGCTGCATTTACCCTTGACTCCAGCAGTTTTTAGCCATCTCCAGAACTCAAACCATTCTTGAATAGGAACTGTTGAGGTCTAGTCCCGCTGGGCTGCAAGTACACTGCCACAAGTAGTACTGAATCTCAAAGTATTTGATTGCCCGTCCCTGCTTCTCACTTGATCAAAACGCATTGGGGTCTGAGTGGAAAAGTCTTGAATACAAGAAATGACACATTTGGGATTCATCTTGGTTGAATTCAAGTCCAGCAATGTGAAATATGCAGCCATGATTAAATCTACATGATAGC

Function

NR:

description
NADH dehydrogenase 1 beta subcomplex subunit 10

GO: NA

KEGG:

id description
K03966 NDUFB10; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001160603.2 True 982 mRNA 0.46 4 57094312 57099778

Neighbor

gene id symbol gene type direction distance location
LOC110486894 LOC106601810 coding downstream 8791 57054453 ~ 57085521 (-)
LOC110486860 tom1l2 coding downstream 86322 56960592 ~ 57007990 (-)
LOC110486859 srebf1 coding downstream 136666 56911365 ~ 56957646 (-)
LOC110515093 LOC106606674 coding downstream 843387 56226179 ~ 56250925 (-)
LOC110539043 LOC106601829 coding downstream 890502 56125290 ~ 56203810 (-)
LOC110485244 LOC106601809 coding upstream 13131 57112909 ~ 57129442 (-)
LOC110486881 LOC106606582 coding upstream 62197 57161975 ~ 57164019 (-)
LOC110516439 LOC106601803 coding upstream 75218 57174996 ~ 57189319 (-)
LOC118936526 LOC106606576 coding upstream 508242 57598591 ~ 57612663 (-)
LOC118938332 LOC106606586 coding upstream 560129 57659907 ~ 57664396 (-)
G1190191 NA non-coding downstream 1374 57090690 ~ 57092938 (-)
G1190225 NA non-coding downstream 17162 57076416 ~ 57077150 (-)
G1190221 NA non-coding downstream 27475 57066501 ~ 57066837 (-)
G1190219 NA non-coding downstream 29650 57063619 ~ 57064662 (-)
G1190242 NA non-coding upstream 52509 57152287 ~ 57152702 (-)
G1190243 NA non-coding upstream 52928 57152706 ~ 57152967 (-)
G1190265 NA non-coding upstream 96655 57196433 ~ 57250738 (-)
G1190268 NA non-coding upstream 99814 57199592 ~ 57241428 (-)
G1190281 NA non-coding upstream 118921 57218699 ~ 57219683 (-)
G1190199 LOC106601813 other downstream 4397 57089171 ~ 57089915 (-)
G1189660 LOC106601786 other downstream 420074 56670293 ~ 56674238 (-)
LOC110485237 LOC106606659 other downstream 983328 56088292 ~ 56110984 (-)
G1189279 LOC106601786 other downstream 1178427 55912224 ~ 55915885 (-)
G1190405 NA other upstream 396210 57495988 ~ 57499155 (-)
LOC110486915 LOC106606556 other upstream 599473 57698059 ~ 57706813 (-)
G1190628 NA other upstream 866359 57964952 ~ 57994099 (-)
LOC110514412 NA other upstream 1487547 58561680 ~ 58588526 (-)
LOC110486955 NA other upstream 1496998 58588778 ~ 58603975 (-)

Expression


Co-expression Network