rfx1a (rfx1)


Basic Information

Item Value
gene id rfx1a
gene name rfx1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 57744990 ~ 57768073 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941670.1
GGGAAGAAAGCGGGTGGGTAGCAACAGTTGCCCCGGTGAGGACGAAGCGCCATAGCCACGGTAGCCCTGGCGACAAGAACCCAGCAACGAGAATCAACAACAACAGCCTGAATccttgaaaaaaataaaaacaaaaataccgGTGGGAAATTCACTTGGAATCAGAGTGTCTGAGTCCCAGTTCTCGTGATGGCCACGACAGGCtacgttggggagttgcagcccGTGACGACCCAGCCCCAAGGGGCAGCGAGTGGGAGTGTGACGGTGGCGGGACAGTCCTCAGCATCCGCTGCCCCACACACCGTGGTAGCTCCTACGCAGCAGTTCCTGGCTCAGCTTCAGACCACAGTGGGGGCTCCTGCAGCCGCAGCAGGACACACCACACCCCCTGCACAAGCCACTCCCACAGCGGCACAGAAGACAGCAGTTGTCCAGGTGGCGCCCACACCGGCTCCTCCCCCCCAGACCCAGTATGTGACGGCTGAGATCCAGGGTTCCTCATCACAGGCCAACAACGCCCAGAACGCCCCCCAGTACATCGTAGTCACCGTCACAGAGGGCTCTCTCCATTCAAGTGACTCTGTGTCTGACTCGAGCCCTCCTCCAGCTGTGGTACAGCAGACTGGGGTTCCCACACAGGTGGTGCAGCAGGTGCAAGCAGCACAGCAGAGGTCAGTGGTGCAGGCAACGTCCCAGATCACAGCCAAGACTGAACAGGGTATCACCACCCAGCTGAGTGTCACCAACCTGCAGCCTGTCCACCTCACTCAggaggtgCAGCAGCAGCTCCAGCAGGTGCCAGTGCAGCATGTGTACACCAATCAGGTGCAGTATGTTGAAGGGGGAGACAACAACTACACCGCCAGCACAATtCGTTCAGGCAGCTTCACCTACACAGACACCCCTCTGTACACTCAGACCACCACCGCCCCTTACTACGAAGCCCCTCCCACTTCTGGCTCACAGGTCCCCACCACCGGCACACCCCTGACCGTCTCCGTGACAACGGGCTCCACCGGTGGTGTGTCTATGTACGTGGCTGGCACAGGCCAGATTGTGGCCAATCCGGCGGCCGCCTCTGGGGGTGGGGCAACGGTGGTGGCGACAGGGGGAACAGCCAATGGGACTGGGGAAGGGGCGGGGGCTAATGGAAGCGGGGGCAGCTATGTGATCCAGGGGGGGTACATGCTGAGTGGCAACAGTCAGGGGGGCTACTCCACCCACAACGCCCGCTCCTCTCCTGCCACCGTCAGTACAACAGAGGGCGAGGAGGGTAGTGGCGTACCGTCGGCAGACAAAAAGGTGCAGTGGCTGCTAGATAACTATGAGACAGCTGAAGGGGTCAGTCTGCCTCGCTCCACCCTCTACTGCCACTACCTGCTGCACTGCCAGGAGCAGAAGCTGGAGCCCGTCAACGCTGCCTCCTTTGGGAAGCTGATCAGATCCGTGTTCATGGGGCTACGCACGCGCCGCCTGGGCACCCGgGGGAACTCCAAGTACCACTATTACGGCCTGAGGATCAAGGCCTGCTCCTCTCTGATCAGACTGATGGAGGACCAGCAGCACCTGGCCATGAGACAGCAGCCCTTCTCTCAGAAACAGAGGTTGAAGCCGGTGCAGAAGGTGGAGGGGATGACCAATGGCATGGCGGCAGGCTCGggccaacagcagcagcagcagggggcGGGGCTCTCTGACATCAGCGCCCAAGTGCAGCAGTACCAGCAGTTCCTGGACGCGTCTCGGACCCTCCCAGAGTTCCCTGACCTTGACCTGCAGGGGAAGGCCCTACCGGAGGGCATAGAACTGGAGCACATCAAGAGCTTCCAGCTGCTGTATCGGGAACACTGTGAGGCTATTCTGGACGTGACGATCAACCTGCAGTTCACCCTGGTGGAGACCCTGTGGAAGACCTTCTGGAGGTTTGAAGAGAGCCAGAGTGGAGACACTGGCACACTGGCTGTACATGATGAGTCTGAGAAGCGCCTGCCTAAGGACTGTCTAGTGATCCTGTGTAAGTACGACCCTGTGCTCCGCTGGAGCCGCGACTGTGACAACACCCTGTACCAGGGCCTGGTGGAGATCCTCATCCCCGATGTGCTGCGGCCCATCCCCAGTGCCTTAACTCAAGCCATCCGCAACTTTGCCAAGAGTCTGGAGAGTTGGTTGACCAACGCTATGATGAACATCCCAGAAGAGATGGTCCGCATTAAGgTAACGTCAGCCAGTTCGTTTGCCCAGACGCTGCGCAGGTACACCTCTCTGAACCACTTGGCCCAGGCAGCCAGGGCCGTGCTACAGAACACAGCTCAGATAAACCAGATGCTCAGCGACCTCAACCGCGTGGACTTCGCCAATGTTCAGgaGCAGGCGTCGTGGGTGTGTCGCTGTGAGGACCGTGTGGTGCAGCAGTTGGAGCAGGACTTCAAGCTGACCCTGCAGCAGCAGAACTCTCTGGAGCAGTGGGCTGCCTGGCTGGACGGGGTGGTCTCCCAGGTCCTAAAGCCCTACCAAGCCAGCGCCGCCTTCCCCAAAGCAGCCAAGCTCTTCCTGCTCAAGTGGTCCTTCTACAGtTCCATGGTGATTAGAGACCTGACTCTGCGTAGTGCTGCCAGCTTCGGATCCTTCCACCTGATCAGACTGCTGTATGATGAGTACATGTACTACCTGATAGAACACAGAGTGGCCCAGGCTAAAGGAGAGACACCCATCGCTGTCATgggagagTTCGCCAGTCTTGGCAGGAGTTTGAACCCACTGGATCCAGACAAAGaagaggaagaggaggaggaagaggagagcgaTGATGAGTGTCAGGAGCTGTCTCTGCCCTCTGACGGGGCGGGCCTGGGGGAGGAGTCTCTGGAGCCGCCTACCAAGCTGGCCAGAACCGACCAGAGAGTACTCTTCACCACGGGGCaggactgaacacacacactgatacacacatgcacaaacacacttcCATTCACAGACTGACTTACACAAATACTCACACATAACTGCATTGATTGATAAACATttgtatacacacatacaccaagATACCCTTGTATACACTAATATGTACACTAGAGGTTGACATTCATTCCTGTTCTGTCTTGTCCTGTAAAAAAATGTTTCCTGTAATGCCCGGATCCTGCAGCGTTTCTATAACCCCGGAACTTTCCTGTCCCATTCTGATAAATATCACTCCCGTCCCATGCAGATTTTTACACACAGAAATCATTTATTCCGTTACGCCTCGATCACACCAATagcgtcattgcattttggtacaccagatgTACATTCATTTCCACTGGAACACtgtgtttgccttgcagcatttcgttgcagaggcagttgcagtgcgttctgtgtggtggaAACGTTGGATTTATCAAACGTATGCATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATCAAACGTATGCATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGGGGATACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTATGTGGGGGATACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGGGGAAACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGTATGCATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGGGGAAACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGATTACATCAGACTGAATGTGAAGACGTTCTGTGTGGGGGATACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGTATGCATCAGACTGTATGTGAAGACGTTCTGTGTGGGGGATACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATCCAACGATTACATCAGACTGTATGTGAAGACGGcctgacagaaatggtagcagaaggtgaaggTTGAACTGTTGTTGAacacatccagatgatgctgcgtaccatTTTGCGTAATGACGCTATCATGTGATCGGGGCGTAGAGTAGTGACTGGCTCCAACTGAAGCGAGGTGTGAGAGTGAGCTGGAAGGAAGGAAATTATCATtagatttagatttttttcattAAGTGAACGATATTAGGCCTACACAGTTTATTTTAATTAAATGCTCCACACATTACCATCCTGTGGATTGTCGATCCTGTGCTGTCCTGAACATGACTCTAGAACTTCCCATTCCTGACAGACCTGTTCCCATGTCAACCTCTGATGTACAGTTTCTACACACATTTGAGTGTAgatattgtacacacacacacacatgttcataCACTCAATAAACATTTCTGCATTCTCTACACATAGATGCTGACCcaacagtacacagacacacacagacacagtcccaATAAGGTCTGTATGGCACAAGTCTGCTGTAAGCACAGATACCACACATGCATGGATGGGCACACAATCACCGGTCCGGCATTGCTGCACAAAGGACACAGGGtgaacttacacacacacacacacacccgacccATGGAGTGAAGAGTGTTTGTTGTCACTTGAATGGATCTGTGTATTGAACAAGGACCTGCCATGTTTCTCTGTATTGGTGTCACTGGCTGACAACAGGGCAGCACAATGTACATGCCAACCTAAACTACCCTCCAACAACTGTCTGCTGTACCAAGGTGGTCCTGAAGATGTGACGGTTAACAGTTTGTCCTCCCTTACCCAACCCTTCTGTATAGGGAGGaacggagggaggaagaggaaatgGCTGCTTACGATTCTGCAGTTCTAAATTGTTCATTTAGCTCTCACTCTCATGTCAATCAAAGCCCAAGAGCCAGTCAGAAGGAGATGGGGCATGTGGGTGACAGCAGATAGACTGTAAAGAgagttgttgtgtgtgtttttgatgcccgtggggtgtgtgtgttttttgatgctcgtggtgtgtgcgtgtgtgtgtgtgtgtgctggggtcCTACTGCTGTGCTGTATTTTTAGGGTGCGATTGAACATGCGTGGATTTATCTGATTGTGTGTGTCTTGTAACGTGTGTCTGGTTGTACGATTGTTGAGTCTGTGCTTCAGAAGAAGTGTTGACTGTATATTTGGTGGATATTTTCAAAGGCATTCAAAATCATTTTGGGTGAATGTTTTTATTGGTTCTTTTTAATTTGATTTGTTCCTTTCCTGAAAAAGAGTGTCATGGTTTTGGGGGTTCCTGTTACAaccactcacacacgcacacaaaataTAAAACCCTGGTTTAAAGGTGTTTCCATGTCAACCCCACAGATGTGGAACAGTAGTCCCACCATTTCTCTCCACTGCAGCATCCATCTGCCTCTGCTGCTGAATGTGCAGTTCTGTACAGAGAGATCTGTTCAATATATATTCCTGTTTGTGTTTTCAAGTGCTTCATTGCCATCTGTTTTATTGGTTTCTGTTGAGACCTTTGTGGCCTCTTGTCGTCCACACGTCATTGCGCCAGCCttattttttatgtttgtttATCTTTTTCATTTCTGCACCAGACATTTCTGATTTCAAATAATTACTTTGTTTACATATTCCAAGAAGGACTGTGCTGGACTGAGTTAAAATGCgataatataattatatatatgtGTGTCACTCTATTTCCTTTTCATTGTCACAAAGTGAACCTTTCTTGTCTGGTGATGTGGTGTCAATCTGTCACACACTAAGtatattttgtgtgtatgtgtatttactGAGAGTCGTTATTGAGTGTGAGTATGTATGTTTGATTTCAGTTCTCCTCAAATGAGCTCTCCATACATACACGCGCCAAGGGTCCTGCTTCGTTTGCACAGTCACAGTCAATGACTGTCCTTTTATATGGTGAGATGTCAGTAGCCTGATCCCAAATATGTTTGTACTATCTTGCCAACTCTTGGTTTGACAATGACCATATAAGTTGGCgagacagcacaaactgatcaGGTACCAGGCTAGAATATAACAGTTCTGCCTATTTATCACAGACAGTCTCCACTTGGAGATCCCTATAGATCTCTttcatgtacagtactgtatatctgtGTCTGATGGAATCACAGCACACAGGTGTAAGGTATTCTGAGGAAAACCCTTACAGTCGGTGCCATTGTTGTATGGGTTTAgcatggtcccagatctgtttgtgctgtcttataGAAGTTGGAATGACAGCACAAGCAGATCTGGGGTCAGGCTCGATGTGAAACGAGACAGGGGAATCAGACACCCTATCTTCCTCTAcatctctcattctgtctcactCGTTTCCTTCCTGCTAAAGTTTTTCtgctgttgttttgttgttgaagCCATTTTCATAGAACATTGTCCACCACGATCAGTTCGGTTGTTGAACATGTATTGTATGAACATTTCATTGCATTTAAGTGTCCCAAGAATGTTTTCAAAGGCAGCAATGCATATCTTGAGCACGCAGCGAGGACCTCTAAACCAGCATGTTTAACACTCTGGGGCGTCTGCTACTACCACAGCTGATGATATATCCTCCCATGTCCTGCGGATCTCCCGATACGATGGCCATTCTTTTCCAGACAAcattttttgtcatttttatAGAGTTCAGTTTCTTACTTCTAAAAACGGTATTGTGTGGCAGTGTTTTATGAATTTGGTCAAATACACGTATGACTGTGCCTTTGGGAGGTTGTGGAATGCACttcaaatgtttttaattttaaaGATATAAAATAAATTAAGAATTTTTTAAGTTGTCA
>XM_036941671.1
GGGAAGAAAGCGGGTGGGTAGCAACAGTTGCCCCGGTGAGGACGAAGCGCCATAGCCACGGTAGCCCTGGCGACAAGAACCCAGCAACGAGAATCAACAACAACAGCCTGAATccttgaaaaaaataaaaacaaaaataccgGTGGGAAATTCACTTGGAATCAGAGTGTCTGAGTCCCAGTTCTCGTGATGGCCACGACAGGCtacgttggggagttgcagcccGTGACGACCCAGCCCCAAGGGGCAGCGAGTGGGAGTGTGACGGTGGCGGGACAGTCCTCAGCATCCGCTGCCCCACACACCGTGGTAGCTCCTACGCAGCAGTTCCTGGCTCAGCTTCAGACCACAGTGGGGGCTCCTGCAGCCGCAGCAGGACACACCACACCCCCTGCACAAGCCACTCCCACAGCGGCACAGAAGACAGCAGTTGTCCAGGTGGCGCCCACACCGGCTCCTCCCCCCCAGACCCAGTATGTGACGGCTGAGATCCAGGGTTCCTCATCACAGGCCAACAACGCCCAGAACGCCCCCCAGTACATCGTAGTCACCGTCACAGAGGGCTCTCTCCATTCAAGTGACTCTGTGTCTGACTCGAGCCCTCCTCCAGCTGTGGTACAGCAGACTGGGGTTCCCACACAGGTGGTGCAGCAGGTGCAAGCAGCACAGCAGAGGTCAGTGGTGCAGGCAACGTCCCAGATCACAGCCAAGACTGAACAGGGTATCACCACCCAGCTGAGTGTCACCAACCTGCAGCCTGTCCACCTCACTCAggaggtgCAGCAGCAGCTCCAGCAGGTGCCAGTGCAGCATGTGTACACCAATCAGGTGCAGTATGTTGAAGGGGGAGACAACAACTACACCGCCAGCACAATtCGTTCAGGCAGCTTCACCTACACAGACACCCCTCTGTACACTCAGACCACCACCGCCCCTTACTACGAAGCCCCTCCCACTTCTGGCTCACAGGTCCCCACCACCGGCACACCCCTGACCGTCTCCGTGACAACGGGCTCCACCGGTGGTGTGTCTATGTACGTGGCTGGCACAGGCCAGATTGTGGCCAATCCGGCGGCCGCCTCTGGGGGTGGGGCAACGGTGGTGGCGACAGGGGGAACAGCCAATGGGACTGGGGAAGGGGCGGGGGCTAATGGAAGCGGGGGCAGCTATGTGATCCAGGGGGGGTACATGCTGAGTGGCAACAGTCAGGGGGGCTACTCCACCCACAACGCCCGCTCCTCTCCTGCCACCGTCAGTACAACAGAGGGCGAGGAGGGTAGTGGCGTACCGTCGGCAGACAAAAAGTGGCTGCTAGATAACTATGAGACAGCTGAAGGGGTCAGTCTGCCTCGCTCCACCCTCTACTGCCACTACCTGCTGCACTGCCAGGAGCAGAAGCTGGAGCCCGTCAACGCTGCCTCCTTTGGGAAGCTGATCAGATCCGTGTTCATGGGGCTACGCACGCGCCGCCTGGGCACCCGgGGGAACTCCAAGTACCACTATTACGGCCTGAGGATCAAGGCCTGCTCCTCTCTGATCAGACTGATGGAGGACCAGCAGCACCTGGCCATGAGACAGCAGCCCTTCTCTCAGAAACAGAGGTTGAAGCCGGTGCAGAAGGTGGAGGGGATGACCAATGGCATGGCGGCAGGCTCGggccaacagcagcagcagcagggggcGGGGCTCTCTGACATCAGCGCCCAAGTGCAGCAGTACCAGCAGTTCCTGGACGCGTCTCGGACCCTCCCAGAGTTCCCTGACCTTGACCTGCAGGGGAAGGCCCTACCGGAGGGCATAGAACTGGAGCACATCAAGAGCTTCCAGCTGCTGTATCGGGAACACTGTGAGGCTATTCTGGACGTGACGATCAACCTGCAGTTCACCCTGGTGGAGACCCTGTGGAAGACCTTCTGGAGGTTTGAAGAGAGCCAGAGTGGAGACACTGGCACACTGGCTGTACATGATGAGTCTGAGAAGCGCCTGCCTAAGGACTGTCTAGTGATCCTGTGTAAGTACGACCCTGTGCTCCGCTGGAGCCGCGACTGTGACAACACCCTGTACCAGGGCCTGGTGGAGATCCTCATCCCCGATGTGCTGCGGCCCATCCCCAGTGCCTTAACTCAAGCCATCCGCAACTTTGCCAAGAGTCTGGAGAGTTGGTTGACCAACGCTATGATGAACATCCCAGAAGAGATGGTCCGCATTAAGgTAACGTCAGCCAGTTCGTTTGCCCAGACGCTGCGCAGGTACACCTCTCTGAACCACTTGGCCCAGGCAGCCAGGGCCGTGCTACAGAACACAGCTCAGATAAACCAGATGCTCAGCGACCTCAACCGCGTGGACTTCGCCAATGTTCAGgaGCAGGCGTCGTGGGTGTGTCGCTGTGAGGACCGTGTGGTGCAGCAGTTGGAGCAGGACTTCAAGCTGACCCTGCAGCAGCAGAACTCTCTGGAGCAGTGGGCTGCCTGGCTGGACGGGGTGGTCTCCCAGGTCCTAAAGCCCTACCAAGCCAGCGCCGCCTTCCCCAAAGCAGCCAAGCTCTTCCTGCTCAAGTGGTCCTTCTACAGtTCCATGGTGATTAGAGACCTGACTCTGCGTAGTGCTGCCAGCTTCGGATCCTTCCACCTGATCAGACTGCTGTATGATGAGTACATGTACTACCTGATAGAACACAGAGTGGCCCAGGCTAAAGGAGAGACACCCATCGCTGTCATgggagagTTCGCCAGTCTTGGCAGGAGTTTGAACCCACTGGATCCAGACAAAGaagaggaagaggaggaggaagaggagagcgaTGATGAGTGTCAGGAGCTGTCTCTGCCCTCTGACGGGGCGGGCCTGGGGGAGGAGTCTCTGGAGCCGCCTACCAAGCTGGCCAGAACCGACCAGAGAGTACTCTTCACCACGGGGCaggactgaacacacacactgatacacacatgcacaaacacacttcCATTCACAGACTGACTTACACAAATACTCACACATAACTGCATTGATTGATAAACATttgtatacacacatacaccaagATACCCTTGTATACACTAATATGTACACTAGAGGTTGACATTCATTCCTGTTCTGTCTTGTCCTGTAAAAAAATGTTTCCTGTAATGCCCGGATCCTGCAGCGTTTCTATAACCCCGGAACTTTCCTGTCCCATTCTGATAAATATCACTCCCGTCCCATGCAGATTTTTACACACAGAAATCATTTATTCCGTTACGCCTCGATCACACCAATagcgtcattgcattttggtacaccagatgTACATTCATTTCCACTGGAACACtgtgtttgccttgcagcatttcgttgcagaggcagttgcagtgcgttctgtgtggtggaAACGTTGGATTTATCAAACGTATGCATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATCAAACGTATGCATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGGGGATACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTATGTGGGGGATACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGGGGAAACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGTATGCATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGGGGAAACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGATTACATCAGACTGAATGTGAAGACGTTCTGTGTGGGGGATACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATAGAACGTATGCATCAGACTGTATGTGAAGACGTTCTGTGTGGGGGATACGTTGGATTTATAGAACGTATACATCAGACTGTATGTGAAGACGTTCTGTGTGGTGGAAACGTTGGATTTATCCAACGATTACATCAGACTGTATGTGAAGACGGcctgacagaaatggtagcagaaggtgaaggTTGAACTGTTGTTGAacacatccagatgatgctgcgtaccatTTTGCGTAATGACGCTATCATGTGATCGGGGCGTAGAGTAGTGACTGGCTCCAACTGAAGCGAGGTGTGAGAGTGAGCTGGAAGGAAGGAAATTATCATtagatttagatttttttcattAAGTGAACGATATTAGGCCTACACAGTTTATTTTAATTAAATGCTCCACACATTACCATCCTGTGGATTGTCGATCCTGTGCTGTCCTGAACATGACTCTAGAACTTCCCATTCCTGACAGACCTGTTCCCATGTCAACCTCTGATGTACAGTTTCTACACACATTTGAGTGTAgatattgtacacacacacacacatgttcataCACTCAATAAACATTTCTGCATTCTCTACACATAGATGCTGACCcaacagtacacagacacacacagacacagtcccaATAAGGTCTGTATGGCACAAGTCTGCTGTAAGCACAGATACCACACATGCATGGATGGGCACACAATCACCGGTCCGGCATTGCTGCACAAAGGACACAGGGtgaacttacacacacacacacacacccgacccATGGAGTGAAGAGTGTTTGTTGTCACTTGAATGGATCTGTGTATTGAACAAGGACCTGCCATGTTTCTCTGTATTGGTGTCACTGGCTGACAACAGGGCAGCACAATGTACATGCCAACCTAAACTACCCTCCAACAACTGTCTGCTGTACCAAGGTGGTCCTGAAGATGTGACGGTTAACAGTTTGTCCTCCCTTACCCAACCCTTCTGTATAGGGAGGaacggagggaggaagaggaaatgGCTGCTTACGATTCTGCAGTTCTAAATTGTTCATTTAGCTCTCACTCTCATGTCAATCAAAGCCCAAGAGCCAGTCAGAAGGAGATGGGGCATGTGGGTGACAGCAGATAGACTGTAAAGAgagttgttgtgtgtgtttttgatgcccgtggggtgtgtgtgttttttgatgctcgtggtgtgtgcgtgtgtgtgtgtgtgtgctggggtcCTACTGCTGTGCTGTATTTTTAGGGTGCGATTGAACATGCGTGGATTTATCTGATTGTGTGTGTCTTGTAACGTGTGTCTGGTTGTACGATTGTTGAGTCTGTGCTTCAGAAGAAGTGTTGACTGTATATTTGGTGGATATTTTCAAAGGCATTCAAAATCATTTTGGGTGAATGTTTTTATTGGTTCTTTTTAATTTGATTTGTTCCTTTCCTGAAAAAGAGTGTCATGGTTTTGGGGGTTCCTGTTACAaccactcacacacgcacacaaaataTAAAACCCTGGTTTAAAGGTGTTTCCATGTCAACCCCACAGATGTGGAACAGTAGTCCCACCATTTCTCTCCACTGCAGCATCCATCTGCCTCTGCTGCTGAATGTGCAGTTCTGTACAGAGAGATCTGTTCAATATATATTCCTGTTTGTGTTTTCAAGTGCTTCATTGCCATCTGTTTTATTGGTTTCTGTTGAGACCTTTGTGGCCTCTTGTCGTCCACACGTCATTGCGCCAGCCttattttttatgtttgtttATCTTTTTCATTTCTGCACCAGACATTTCTGATTTCAAATAATTACTTTGTTTACATATTCCAAGAAGGACTGTGCTGGACTGAGTTAAAATGCgataatataattatatatatgtGTGTCACTCTATTTCCTTTTCATTGTCACAAAGTGAACCTTTCTTGTCTGGTGATGTGGTGTCAATCTGTCACACACTAAGtatattttgtgtgtatgtgtatttactGAGAGTCGTTATTGAGTGTGAGTATGTATGTTTGATTTCAGTTCTCCTCAAATGAGCTCTCCATACATACACGCGCCAAGGGTCCTGCTTCGTTTGCACAGTCACAGTCAATGACTGTCCTTTTATATGGTGAGATGTCAGTAGCCTGATCCCAAATATGTTTGTACTATCTTGCCAACTCTTGGTTTGACAATGACCATATAAGTTGGCgagacagcacaaactgatcaGGTACCAGGCTAGAATATAACAGTTCTGCCTATTTATCACAGACAGTCTCCACTTGGAGATCCCTATAGATCTCTttcatgtacagtactgtatatctgtGTCTGATGGAATCACAGCACACAGGTGTAAGGTATTCTGAGGAAAACCCTTACAGTCGGTGCCATTGTTGTATGGGTTTAgcatggtcccagatctgtttgtgctgtcttataGAAGTTGGAATGACAGCACAAGCAGATCTGGGGTCAGGCTCGATGTGAAACGAGACAGGGGAATCAGACACCCTATCTTCCTCTAcatctctcattctgtctcactCGTTTCCTTCCTGCTAAAGTTTTTCtgctgttgttttgttgttgaagCCATTTTCATAGAACATTGTCCACCACGATCAGTTCGGTTGTTGAACATGTATTGTATGAACATTTCATTGCATTTAAGTGTCCCAAGAATGTTTTCAAAGGCAGCAATGCATATCTTGAGCACGCAGCGAGGACCTCTAAACCAGCATGTTTAACACTCTGGGGCGTCTGCTACTACCACAGCTGATGATATATCCTCCCATGTCCTGCGGATCTCCCGATACGATGGCCATTCTTTTCCAGACAAcattttttgtcatttttatAGAGTTCAGTTTCTTACTTCTAAAAACGGTATTGTGTGGCAGTGTTTTATGAATTTGGTCAAATACACGTATGACTGTGCCTTTGGGAGGTTGTGGAATGCACttcaaatgtttttaattttaaaGATATAAAATAAATTAAGAATTTTTTAAGTTGTCA

Function

symbol description
rfx1 Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Located in nucleoplasm.

NR:

description
PREDICTED: MHC class II regulatory factor RFX1 isoform X3

GO: NA

KEGG:

id description
K09173 RFX1_2_3; regulatory factor X 1/2/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941670.1 False 7162 mRNA 0.49 19 57744990 57768073
XM_036941671.1 True 7156 mRNA 0.49 19 57744990 57768073

Neighbor

gene id symbol gene type direction distance location
LOC110486913 LOC106606569 coding downstream 17303 57707189 ~ 57727687 (-)
LOC110486915 LOC106606556 coding downstream 38177 57698059 ~ 57706813 (-)
LOC110486912 LOC106601792 coding downstream 47169 57666215 ~ 57697821 (-)
LOC118938332 LOC106606586 coding downstream 80594 57659907 ~ 57664396 (-)
LOC118936526 LOC106606576 coding downstream 132327 57598591 ~ 57612663 (-)
LOC110486935 LOC106606473 coding upstream 77713 57845786 ~ 57848186 (-)
LOC110486920 LOC106606537 coding upstream 129093 57897166 ~ 57955613 (-)
LOC118938684 NA coding upstream 199476 57967549 ~ 57967702 (-)
LOC118938640 NA coding upstream 200200 57968273 ~ 57970108 (-)
LOC118938644 NA coding upstream 208095 57976168 ~ 57980098 (-)
G1190481 NA non-coding downstream 5935 57737345 ~ 57739055 (-)
G1190419 NA non-coding downstream 206164 57538367 ~ 57538826 (-)
G1190580 NA non-coding upstream 33172 57801245 ~ 57801960 (-)
G1190578 NA non-coding upstream 37907 57805980 ~ 57806220 (-)
G1190583 NA non-coding upstream 38895 57806968 ~ 57807576 (-)
G1190616 NA non-coding upstream 117504 57885577 ~ 57885846 (-)
G1190405 NA other downstream 245835 57495988 ~ 57499155 (-)
G1190199 LOC106601813 other downstream 655075 57089171 ~ 57089915 (-)
LOC110486894 LOC106601810 other downstream 659519 57054453 ~ 57085521 (-)
G1189660 LOC106601786 other downstream 1070752 56670293 ~ 56674238 (-)
G1190628 NA other upstream 198064 57964952 ~ 57994099 (-)
LOC110514412 NA other upstream 819252 58561680 ~ 58588526 (-)
LOC110486955 NA other upstream 828703 58588778 ~ 58603975 (-)
G1191298 LOC106606554 other upstream 991650 58759723 ~ 58762086 (-)
G1191335 NA other upstream 1099990 58868063 ~ 58868971 (-)

Expression


Co-expression Network