rln3a (LOC106606557)


Basic Information

Item Value
gene id rln3a
gene name LOC106606557
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 57771440 ~ 57773246 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001281348.1
GTGCAAGTTCCATGTCTACCTCGTATGGCTGAGGACCCCTTTATAAACCAATACCAGGTCATTGGGGAAGTCACACAACACTCGcgaccacagagagacagagaaaaacacCTGCTCCAAACAGCCCAGTCTACCATTGAAGaatctattctctctcctccttttttgCTCACTCATTCATTTACCTCCTGGGACATGATGTGGAAACCACTGGTATTagctgtgtgtttgttagtggctGGGGTGCAGGGGATGGAGCGCCCCACGTATGGAGTGAAGCTATGTGGCCGGGAGTTCATCCGGGCGGTCATCTTCACCTGTGGAGGATCTCGCTGGAGACGGTCACTTGGGAGTGCAGGAGACTTCCCTCAGGACCCTTTCAGCTCCCATGACGAGGACTCGTCTGAAGGCTGGAACTCAGACTCCCAGGTCCCAGAGGGTCCCTTCCAGCATGTCCAGGAGGGTGGGGTGTTCATCAGCAGGCCAGCCCGCTCCCTCATCTCAGAGGAGATACTGGAGGCTCTCCGTATGTCAGACCGAAAGGGCCGTGATGTGGTGGTGGGCCTGTCCAACGCCTGCTGCAAGTGGGGCTGCAGCAAGGGAGACATCAGCTCCCTTTGCTGAGAATCCACCCCATTCTCTATCCTCCCATGCACACACATAGCCCTACACATACCTGGTAttttctcatatctctctctctcggtttttCTAACTGCTCTCCAGAGTGTTTCCGAGTTAAAGTATCATGTTAACTGTGCAGGGAGAATATAACCTTATTCTCCATATAAACCCAGTCGGTATTAGATTGAACGTCATGACCCTACCTGCCTGTAA

Function

NR:

description
relaxin-3-like isoform X1

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG:

id description
K22000 RLN3; relaxin 3

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001281348.1 True 837 mRNA 0.52 2 57771440 57773246

Neighbor

gene id symbol gene type direction distance location
LOC110486914 LOC106606529 coding upstream 32376 57728189 ~ 57739064 (+)
c13h17orf75 LOC106601793 coding upstream 116372 57638431 ~ 57655166 (+)
LOC110486909 LOC106601794 coding upstream 146035 57613961 ~ 57625405 (+)
LOC110514101 LOC106606600 coding upstream 170117 57522756 ~ 57640558 (+)
LOC110516540 LOC106606577 coding upstream 311979 57303445 ~ 57459461 (+)
LOC110486918 LOC106568321 coding downstream 1663 57774909 ~ 57806286 (+)
LOC110486936 LOC106606533 coding downstream 37652 57810898 ~ 57837364 (+)
LOC118938624 NA coding downstream 40092 57813338 ~ 57813408 (+)
LOC118938626 NA coding downstream 42193 57815439 ~ 57815509 (+)
LOC118938623 NA coding downstream 43914 57817160 ~ 57817230 (+)
G1190499 NA non-coding upstream 1513 57769581 ~ 57769927 (+)
G1190093 NA non-coding upstream 6935 57764243 ~ 57764505 (+)
G1190085 NA non-coding upstream 25038 57744825 ~ 57746402 (+)
G1190084 NA non-coding upstream 26691 57744251 ~ 57744749 (+)
G1190083 NA non-coding upstream 30915 57740077 ~ 57740525 (+)
G1190533 NA non-coding downstream 115035 57888281 ~ 57888740 (+)
G1190535 NA non-coding downstream 121485 57894731 ~ 57895030 (+)
G1190538 NA non-coding downstream 123928 57897174 ~ 57898144 (+)
G1190536 NA non-coding downstream 125040 57898286 ~ 57899134 (+)
G1190543 NA non-coding downstream 132199 57905445 ~ 57905669 (+)
G1189819 NA other upstream 715823 57054453 ~ 57055617 (+)
G1189675 srebf1 other upstream 845833 56877928 ~ 56925607 (+)
G1189738 NA other upstream 934444 56836416 ~ 56836996 (+)
G1190568 NA other downstream 192270 57950494 ~ 57994502 (+)
G1190689 NA other downstream 267640 58040886 ~ 58041295 (+)
LOC110538555 NA other downstream 763581 58521363 ~ 58557066 (+)
G1191444 NA other downstream 1494825 59268071 ~ 59270262 (+)
G1191529 LOC106601890 other downstream 1612926 59381313 ~ 59388776 (+)

Expression


Co-expression Network