Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938626 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 57815439 ~ 57815509 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035833.1 | True | 71 | mRNA | 0.44 | 1 | 57815439 | 57815509 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938624 | NA | coding | upstream | 2031 | 57813338 ~ 57813408 (+) |
| LOC110486918 | LOC106568321 | coding | upstream | 9153 | 57774909 ~ 57806286 (+) |
| rln3a | LOC106606557 | coding | upstream | 42193 | 57771440 ~ 57773246 (+) |
| LOC110486914 | LOC106606529 | coding | upstream | 76375 | 57728189 ~ 57739064 (+) |
| c13h17orf75 | LOC106601793 | coding | upstream | 160371 | 57638431 ~ 57655166 (+) |
| LOC118938623 | NA | coding | downstream | 1651 | 57817160 ~ 57817230 (+) |
| LOC118938625 | NA | coding | downstream | 5252 | 57820761 ~ 57820831 (+) |
| LOC110486928 | LOC106606535 | coding | downstream | 23452 | 57838961 ~ 57845708 (+) |
| LOC110486929 | LOC106592861 | coding | downstream | 31938 | 57847447 ~ 57857994 (+) |
| LOC110512521 | LOC106606521 | coding | downstream | 233853 | 58049362 ~ 58052530 (+) |
| G1190499 | NA | non-coding | upstream | 45512 | 57769581 ~ 57769927 (+) |
| G1190093 | NA | non-coding | upstream | 50934 | 57764243 ~ 57764505 (+) |
| G1190085 | NA | non-coding | upstream | 69037 | 57744825 ~ 57746402 (+) |
| G1190084 | NA | non-coding | upstream | 70690 | 57744251 ~ 57744749 (+) |
| G1190083 | NA | non-coding | upstream | 74914 | 57740077 ~ 57740525 (+) |
| G1190533 | NA | non-coding | downstream | 72772 | 57888281 ~ 57888740 (+) |
| G1190535 | NA | non-coding | downstream | 79222 | 57894731 ~ 57895030 (+) |
| G1190538 | NA | non-coding | downstream | 81665 | 57897174 ~ 57898144 (+) |
| G1190536 | NA | non-coding | downstream | 82777 | 57898286 ~ 57899134 (+) |
| G1190543 | NA | non-coding | downstream | 89936 | 57905445 ~ 57905669 (+) |
| LOC110514101 | LOC106606600 | other | upstream | 174881 | 57522756 ~ 57640558 (+) |
| LOC110486909 | LOC106601794 | other | upstream | 190034 | 57613961 ~ 57625405 (+) |
| G1189819 | NA | other | upstream | 759822 | 57054453 ~ 57055617 (+) |
| G1189675 | srebf1 | other | upstream | 889832 | 56877928 ~ 56925607 (+) |
| G1189738 | NA | other | upstream | 978443 | 56836416 ~ 56836996 (+) |
| G1190568 | NA | other | downstream | 150007 | 57950494 ~ 57994502 (+) |
| G1190689 | NA | other | downstream | 225377 | 58040886 ~ 58041295 (+) |
| LOC110538555 | NA | other | downstream | 721318 | 58521363 ~ 58557066 (+) |
| G1191444 | NA | other | downstream | 1452562 | 59268071 ~ 59270262 (+) |
| G1191529 | LOC106601890 | other | downstream | 1570663 | 59381313 ~ 59388776 (+) |
