LOC110486928 (LOC106606535)


Basic Information

Item Value
gene id LOC110486928
gene name LOC106606535
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 57838961 ~ 57845708 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036941680.1
AAACCCCATTTGTTAGGGTCGTCGCGTCACTGGCAGTCATAAACCGTACCTATTTCTAGAATTTATCTTATTAAAATCTCATTTTAAAcgtaaccttaaccacactgctcaTTTGAGATCCAAATGCTCGTTTTTGCTTTTACAATACAGCTATCTAGCTAGTGGAAACCTAATTTGAATGAAGGATCAACTTCTTACTGTAGCTAGCAACTCATTTCTAACTGATTTTTTAGAGAAGAAGAATCGGTCAGTGTTTTCTTTAAATATCGAGGAGCTGATTAGCACAGTTGTGAACTTGTACATGTGATCAGTTCCAGGATTACTCGCTTGATTGGCAAACAAAGACCATCTTGCAAGTTAGCGTGCTTGACACTGATAGTATAGTACCAGCCAACGCCCGGTAGTAACCGTCGTTGTCTAGCTGTTAGGCTTTTTCGTCTCGCACCGTGCTCATATTGAAAATATTAATTATACAGTTTAAACAAGAGAAGGCATACGGGGACTGACCAAGGCTACTGCTGTCAAATGAACTGTCTGTCGGACCTCCCCATAAGTGACATAGGGAAGTGTGGTAAGTGGAGTGGATGTCCGAGCCTCGGGTCACTGTGGGGCAAGATGAGGCAGGGGccgggagaggggagaaagaagcTAAATCGGCACCACTGAAACAGCCCTCCAGTGAAGCCTCCAGGCCTGGACAGCTGGGGCTGCCCCCAGGCTCTCAGCTCCCTTCTACTGAACCAAGCCCCTCCCCGTCTGCTGAAGGAAGCGGCTTGCTGTCGTTGCCGTGGGAGATGGTGGCTCGCATCGCCTCGCACCTCCCGGCACAGTGTGTCATCACGGTCCTGCCACAGGTGTGTCACGCCCTGGGAAATGTGGGTAAGGACAGCACGGCGTGGCAGTTGCGGGCACGCAGGCTAACTGGCCCCAGAGCTTCCTTCCCCGTGGGGCCACGAGATGGCTTCGACTGGCCCTCGGCCTGCCTGGAGATGGAGGAGCTGATCGCTTGCTGGACGGGCCAGGGGGAGAGGGCTGCCAGGGAAGCCGAGCaggcagagcgggagagagaggtggagagggtccaggagagggaaagggatagAGAGGCCCTGGCAGAGGAAGGGATTGGAGAgtgggaggaggtggaagagggcaGACCCCAAGTGGATGAAGGGGTAGATGAAGTGGGTTTTCAAGTGGAGGGCGTGATGGCGGTAGCGTGGGATAGGGAGGAgttgatggaggagggagagatgccgCAAGATAGGGAAGGGGATCTACAGATGGGAgttggggagggagaggagaggcaggaggctGCAGCCGAGGccatgatggaggaggagagagatgatgaaCAAGGTGTCCTGGAGGCCATcgaagtggaggagagagtgggagtttTGGCGGATAGAGACGGTCAAGATAACATAGCGGGCCCGAGATTGGGAagcgagggggagagaaacaggTCCAGCCGCGCTCCCAGTCCTCCCCCAGCCCTGGAGCGCCTCTCCCTCCCCTCGGGTCACATCGCTGAGGTCAACTCGGTCCTCTTGGTAGGGGGCGACGGGGCGTTGTGTGCCTCAGGCTCCCGTGACAGGAACGTGAACCTGTGGGACCTACGGGACGGGGGCTCCACGGGCAGGCTGCTCCATACACTGGGGGGCCAGGGCCTCTTCAGCACCCACAAAGGCTGGGTCTGGTGCCTGGCGGCCCGGGGACCCCTGCTGGCCTCGGGCTCCTTCGACAGCACAGTGAGGCTATGGGACCTGGGGGCCCAAGGAGCTGAGAGAGGCCTAATCAGGGCCCGGGCTGCCGTGCTCTGCCTGGCCCTCCCCCAGAAGGACGTGCTGCTGGCCGGCACCTACGACAAGAAGGTCAGCGTCTACGACACAAGAGTGGCGGAGCCTCTGGTAAAGAGCCTGCGTCTCCATAGCAACGCGGTGCTGTGCCTGGTAGCGGACGAGCAGTACATCCTTTCTGGGAGTAAAGACCGCACTGTGGTCATCTACGACCGAAGAGCAGGGAAAACCCTACAGAAACTACAGCTGGGCTCCTACCTGCTGTCAATGTGCTACAGTGACAGTGAGGTGTGGGCGGGGGACAACCGGGGCATTCTCCATGCCTTCTCCATGCAGGCCGGTTTCTTCAAACCCCTCTCCCAGTTCGACGTGGGACACACCTCACTGGTCACCGGCATCCACAGGTCCCCTGGGAGCCTCTACACCTGCTCCGCTGACCGCACCATCAAGGTGCACCTCCCCTGTGCCCCTCCAAGGACGCTGTGCACACTGCACCACCAAGCAGGTGTCAATGGGttgAGTGTCGAAGCAGGAGTGCTGGCGATCGCGTCAGGAGAAAtgtgtgtggaggtgtggagGGCCAGGAGGTGAGGGGGGCCACACCCACCCTAATCTACTTACGTTCCTGAAGTGATGCAAGATGACTGACGTATAATGGTCTGTCATTTAAATTATCTACTTTCTCATACTGTATGCTGTGAGAATGTTGCCGTGAAGGACCAGTGCTCTTAGCTTTACCCCAAAAACTATATACAAGCCAAACATatttagtgtgtctgtgtgattcccGTGTATTTTATCAAAGAAAATAAGAAAAGAACACACAAAGGCTTCCTTAACTAATGTAAAGAAATGTAAAAGAAAAGGCCTAAGATAATAGCACTTCATGGTAtagtgtagttctgtctgtgtgtccctgtgttgTTGACCCAGCACTCGTTCAAACGATTTCACATAAACTGAATTTGGGAGTTAATTTGAGGCACAGCACTACTGAAGGGTTTTAAACACTTGTACATGATTTGATTTTTCATTGGCCTGATTTTAGCTTGTTAATTAAAATGAGGACATTCCGCCACCAGCATTCCAGACAGTTGGTCTCTAGAAAACAGATTAAGTATTTTTCTCTGACAATTGAAACAGATTCGGAAACACAATGGAAAGAATGATTCAAGCCGTTCTGACACACTGATTGTAAAGTATTTTGGTCTAACTGTCATAATGTGTGTAGTGGCGTTCTTATACTCAGTACCACAGCACTTGTTTGTCAATTACACTGTTTTGAGTTCTTCCTCTTTGTCATTCTCTCTTAGGGTAACTACTTTACCAACTCTTAACGTTTTTATTTAATTCTGCACTGTTGAGGAAAGCGCTGTACTGTTACACACGTGacaaaataaactttgatttgaatctG

Function

NR:

description
F-box/WD repeat-containing protein 9

GO: NA

KEGG:

id description
K10265 FBXW9; F-box and WD-40 domain protein 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036941680.1 True 3222 mRNA 0.52 8 57838961 57845708

Neighbor

gene id symbol gene type direction distance location
LOC110486936 LOC106606533 coding upstream 1597 57810898 ~ 57837364 (+)
LOC118938625 NA coding upstream 18130 57820761 ~ 57820831 (+)
LOC118938623 NA coding upstream 21731 57817160 ~ 57817230 (+)
LOC118938626 NA coding upstream 23452 57815439 ~ 57815509 (+)
LOC118938624 NA coding upstream 25553 57813338 ~ 57813408 (+)
LOC110486929 LOC106592861 coding downstream 1739 57847447 ~ 57857994 (+)
LOC110512521 LOC106606521 coding downstream 203654 58049362 ~ 58052530 (+)
LOC110486927 LOC106606522 coding downstream 209317 58055025 ~ 58058043 (+)
LOC110485250 LOC106606520 coding downstream 237554 58083262 ~ 58110194 (+)
LOC110486938 LOC106611499 coding downstream 285577 58131285 ~ 58195479 (+)
G1190499 NA non-coding upstream 69034 57769581 ~ 57769927 (+)
G1190093 NA non-coding upstream 74456 57764243 ~ 57764505 (+)
G1190085 NA non-coding upstream 92559 57744825 ~ 57746402 (+)
G1190084 NA non-coding upstream 94212 57744251 ~ 57744749 (+)
G1190083 NA non-coding upstream 98436 57740077 ~ 57740525 (+)
G1190533 NA non-coding downstream 42573 57888281 ~ 57888740 (+)
G1190535 NA non-coding downstream 49023 57894731 ~ 57895030 (+)
G1190538 NA non-coding downstream 51466 57897174 ~ 57898144 (+)
G1190536 NA non-coding downstream 52578 57898286 ~ 57899134 (+)
G1190543 NA non-coding downstream 59737 57905445 ~ 57905669 (+)
LOC110514101 LOC106606600 other upstream 198403 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other upstream 213556 57613961 ~ 57625405 (+)
G1189819 NA other upstream 783344 57054453 ~ 57055617 (+)
G1189675 srebf1 other upstream 913354 56877928 ~ 56925607 (+)
G1189738 NA other upstream 1001965 56836416 ~ 56836996 (+)
G1190568 NA other downstream 119808 57950494 ~ 57994502 (+)
G1190689 NA other downstream 195178 58040886 ~ 58041295 (+)
LOC110538555 NA other downstream 691119 58521363 ~ 58557066 (+)
G1191444 NA other downstream 1422363 59268071 ~ 59270262 (+)
G1191529 LOC106601890 other downstream 1540464 59381313 ~ 59388776 (+)

Expression


Co-expression Network