Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110487048 |
| gene name | LOC106601931 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 62028985 ~ 62030505 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035627.1 | True | 1096 | mRNA | 0.42 | 2 | 62028985 | 62030505 |
62,025,600
62,026,000
62,026,400
62,026,800
62,027,200
62,027,600
62,028,000
62,028,400
62,028,800
62,029,200
62,029,600
62,030,000
62,030,400
62,030,800
62,031,200
62,031,600
62,032,000
62,032,400
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938098 | NA | coding | upstream | 83625 | 61944374 ~ 61945360 (+) |
| LOC110538832 | NA | coding | upstream | 634642 | 61249492 ~ 61394343 (+) |
| LOC110514624 | LOC105012866 | coding | upstream | 1025640 | 60925443 ~ 61003345 (+) |
| LOC110486968 | LOC106606458 | coding | upstream | 1157441 | 60869364 ~ 60871544 (+) |
| LOC110486975 | LOC106606457 | coding | upstream | 1243269 | 60784142 ~ 60785716 (+) |
| LOC118938343 | LOC100194517 | coding | downstream | 332831 | 62363336 ~ 62371232 (+) |
| LOC110487067 | cant1 | coding | downstream | 340932 | 62371437 ~ 62381775 (+) |
| LOC110487068 | LOC106606433 | coding | downstream | 366499 | 62397004 ~ 62404890 (+) |
| LOC118938344 | LOC106591286 | coding | downstream | 384312 | 62414817 ~ 62418534 (+) |
| LOC110538848 | LOC100136244 | coding | downstream | 511318 | 62541823 ~ 62567052 (+) |
| G1193909 | NA | non-coding | upstream | 11090 | 62014731 ~ 62017895 (+) |
| G1193876 | LOC106606438 | non-coding | upstream | 57359 | 61969904 ~ 61971626 (+) |
| G1193840 | NA | non-coding | upstream | 70415 | 61957324 ~ 61958570 (+) |
| G1193837 | NA | non-coding | upstream | 80785 | 61923961 ~ 61948200 (+) |
| G1193848 | NA | non-coding | upstream | 108766 | 61919928 ~ 61920219 (+) |
| G1193941 | NA | non-coding | downstream | 48068 | 62078573 ~ 62080616 (+) |
| G1193958 | NA | non-coding | downstream | 76614 | 62107119 ~ 62107351 (+) |
| G1193962 | NA | non-coding | downstream | 83534 | 62114039 ~ 62115667 (+) |
| G1193963 | NA | non-coding | downstream | 86644 | 62117149 ~ 62118247 (+) |
| G1193964 | LOC106606437 | non-coding | downstream | 87911 | 62118416 ~ 62121427 (+) |
| G1193742 | NA | other | upstream | 182962 | 61788988 ~ 61846023 (+) |
| G1193515 | NA | other | upstream | 505915 | 61522404 ~ 61523070 (+) |
| LOC110515874 | LOC106601846 | other | upstream | 1575641 | 60431856 ~ 60458629 (+) |
| LOC118938341 | NA | other | upstream | 1722023 | 60304345 ~ 60307074 (+) |
| G1191844 | NA | other | upstream | 1907845 | 60064762 ~ 60121140 (+) |
| G1193989 | NA | other | downstream | 159220 | 62189725 ~ 62191046 (+) |
| LOC110485308 | LOC106601924 | other | downstream | 570356 | 62569908 ~ 62605641 (+) |
| G1194696 | LOC106601958 | other | downstream | 933104 | 62963609 ~ 62979131 (+) |
| G1194739 | NA | other | downstream | 1059798 | 63090303 ~ 63091342 (+) |
