Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938350 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 63740281 ~ 63763190 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035641.1 | False | 2466 | mRNA | 0.39 | 2 | 63740281 | 63756703 |
| TU1364154 | False | 316 | lncRNA | 0.38 | 2 | 63741525 | 63763190 |
| TU1364151 | True | 713 | lncRNA | 0.41 | 3 | 63741782 | 63756487 |
63,720,000
63,724,000
63,728,000
63,732,000
63,736,000
63,740,000
63,744,000
63,748,000
63,752,000
63,756,000
63,760,000
63,764,000
63,768,000
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487444 | LOC106601894 | coding | downstream | 18408 | 63714382 ~ 63721873 (-) |
| trub1 | trub1 | coding | downstream | 39566 | 63699247 ~ 63700715 (-) |
| LOC110487455 | LOC106601935 | coding | downstream | 107139 | 63627507 ~ 63633142 (-) |
| LOC110487439 | mkk6a | coding | downstream | 113990 | 63601361 ~ 63626291 (-) |
| LOC110485277 | LOC106602060 | coding | downstream | 230894 | 63495359 ~ 63509387 (-) |
| LOC110487429 | LOC106601877 | coding | upstream | 41550 | 63798253 ~ 63812083 (-) |
| LOC110487446 | LOC106606413 | coding | upstream | 63521 | 63820224 ~ 63825369 (-) |
| LOC110487454 | gys1 | coding | upstream | 81691 | 63838394 ~ 63863342 (-) |
| LOC118936516 | LOC106606377 | coding | upstream | 155786 | 63912489 ~ 63951876 (-) |
| LOC110487030 | p-ras | coding | upstream | 205773 | 63962476 ~ 63970472 (-) |
| G1195525 | NA | non-coding | downstream | 26018 | 63711246 ~ 63714263 (-) |
| G1195514 | LOC106606343 | non-coding | downstream | 44541 | 63680056 ~ 63695740 (-) |
| G1195512 | LOC106606343 | non-coding | downstream | 46948 | 63676957 ~ 63693333 (-) |
| G1195499 | NA | non-coding | downstream | 100635 | 63638966 ~ 63639646 (-) |
| G1195496 | NA | non-coding | downstream | 115534 | 63624480 ~ 63624747 (-) |
| G1195562 | NA | non-coding | upstream | 26813 | 63783516 ~ 63786090 (-) |
| G1195569 | NA | non-coding | upstream | 70363 | 63827066 ~ 63827277 (-) |
| G1195574 | NA | non-coding | upstream | 94439 | 63851142 ~ 63852383 (-) |
| G1195589 | LOC106606382 | non-coding | upstream | 130726 | 63887429 ~ 63891370 (-) |
| G1194933 | NA | other | downstream | 602559 | 63137040 ~ 63137722 (-) |
| LOC110486089 | LOC106606381 | other | downstream | 658708 | 63032412 ~ 63218815 (-) |
| G1194684 | NA | other | downstream | 803208 | 62935786 ~ 62937073 (-) |
| LOC118938348 | LOC106606427 | other | downstream | 813465 | 62899607 ~ 62926919 (-) |
| G1195624 | NA | other | upstream | 188373 | 63945076 ~ 63945764 (-) |
| LOC110487482 | LOC106606373 | other | upstream | 577990 | 64334669 ~ 64362841 (-) |
| G1195997 | NA | other | upstream | 720267 | 64476970 ~ 64477372 (-) |
| G1196113 | NA | other | upstream | 1037945 | 64794648 ~ 64795071 (-) |
| G1196205 | LOC106606311 | other | upstream | 1195087 | 64951790 ~ 64963785 (-) |
