Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110487429 |
| gene name | LOC106601877 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 63798253 ~ 63812083 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006414 | translational elongation | biological_process |
| GO:0006184 | obsolete GTP catabolic process | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| GO:0003746 | translation elongation factor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036941902.1 | False | 1671 | mRNA | 0.54 | 11 | 63798253 | 63812083 |
| TU1364170 | True | 221 | lncRNA | 0.43 | 1 | 63798253 | 63798473 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938350 | NA | coding | downstream | 41550 | 63740281 ~ 63763190 (-) |
| LOC110487444 | LOC106601894 | coding | downstream | 76380 | 63714382 ~ 63721873 (-) |
| trub1 | trub1 | coding | downstream | 97538 | 63699247 ~ 63700715 (-) |
| LOC110487455 | LOC106601935 | coding | downstream | 165111 | 63627507 ~ 63633142 (-) |
| LOC110487439 | mkk6a | coding | downstream | 171962 | 63601361 ~ 63626291 (-) |
| LOC110487446 | LOC106606413 | coding | upstream | 8141 | 63820224 ~ 63825369 (-) |
| LOC110487454 | gys1 | coding | upstream | 26311 | 63838394 ~ 63863342 (-) |
| LOC118936516 | LOC106606377 | coding | upstream | 100406 | 63912489 ~ 63951876 (-) |
| LOC110487030 | p-ras | coding | upstream | 150393 | 63962476 ~ 63970472 (-) |
| LOC110487029 | LOC105029052 | coding | upstream | 161197 | 63973280 ~ 64040299 (-) |
| G1195529 | NA | non-coding | downstream | 7606 | 63736375 ~ 63790647 (-) |
| G1195562 | NA | non-coding | downstream | 12163 | 63783516 ~ 63786090 (-) |
| G1195554 | NA | non-coding | downstream | 42508 | 63748413 ~ 63755745 (-) |
| G1195555 | NA | non-coding | downstream | 51763 | 63742946 ~ 63746490 (-) |
| G1195569 | NA | non-coding | upstream | 14983 | 63827066 ~ 63827277 (-) |
| G1195574 | NA | non-coding | upstream | 39059 | 63851142 ~ 63852383 (-) |
| G1195589 | LOC106606382 | non-coding | upstream | 75346 | 63887429 ~ 63891370 (-) |
| G1195590 | NA | non-coding | upstream | 79442 | 63891525 ~ 63892705 (-) |
| G1195593 | NA | non-coding | upstream | 81330 | 63893413 ~ 63893903 (-) |
| LOC110485277 | LOC106602060 | other | downstream | 292729 | 63495359 ~ 63509387 (-) |
| G1194933 | NA | other | downstream | 660531 | 63137040 ~ 63137722 (-) |
| LOC110486089 | LOC106606381 | other | downstream | 716680 | 63032412 ~ 63218815 (-) |
| G1194684 | NA | other | downstream | 861180 | 62935786 ~ 62937073 (-) |
| LOC118938348 | LOC106606427 | other | downstream | 871437 | 62899607 ~ 62926919 (-) |
| G1195624 | NA | other | upstream | 132993 | 63945076 ~ 63945764 (-) |
| LOC110487482 | LOC106606373 | other | upstream | 522610 | 64334669 ~ 64362841 (-) |
| G1195997 | NA | other | upstream | 664887 | 64476970 ~ 64477372 (-) |
| G1196113 | NA | other | upstream | 982565 | 64794648 ~ 64795071 (-) |
| G1196205 | LOC106606311 | other | upstream | 1139707 | 64951790 ~ 64963785 (-) |
