Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938357 |
| gene name | LOC106595583 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 65487948 ~ 65503404 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106593572 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036941967.1 | False | 2052 | mRNA | 0.52 | 10 | 65487948 | 65503391 |
| XM_036941968.1 | False | 1948 | mRNA | 0.52 | 9 | 65487948 | 65503392 |
| TU1365410 | False | 644 | TUCP | 0.50 | 7 | 65491941 | 65503340 |
| TU1365411 | False | 708 | TUCP | 0.50 | 7 | 65491941 | 65503404 |
| TU1365414 | True | 539 | TUCP | 0.49 | 6 | 65491941 | 65503340 |
65,480,000
65,482,000
65,484,000
65,486,000
65,488,000
65,490,000
65,492,000
65,494,000
65,496,000
65,498,000
65,500,000
65,502,000
65,504,000
65,506,000
65,508,000
65,510,000
65,512,000
65,514,000
NC_048577.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936529 | LOC105012854 | coding | downstream | 442487 | 64969176 ~ 65045461 (-) |
| LOC110487107 | LOC106606311 | coding | downstream | 524125 | 64952654 ~ 64963823 (-) |
| LOC118938356 | NA | coding | downstream | 533724 | 64951543 ~ 64954224 (-) |
| LOC110487480 | LOC106606286 | coding | downstream | 542297 | 64798656 ~ 64945651 (-) |
| LOC110486630 | LOC106601477 | coding | downstream | 812915 | 64667592 ~ 64675033 (-) |
| LOC118938101 | LOC106603827 | coding | upstream | 716673 | 66220065 ~ 66267701 (-) |
| LOC118938102 | LOC106603753 | coding | upstream | 721758 | 66225150 ~ 66385923 (-) |
| LOC118938480 | NA | coding | upstream | 920205 | 66423597 ~ 66424229 (-) |
| LOC118938476 | LOC106603753 | coding | upstream | 930997 | 66434389 ~ 66435647 (-) |
| LOC110519882 | LOC106603827 | coding | upstream | 1173939 | 66677331 ~ 66679483 (-) |
| G1196552 | NA | non-coding | downstream | 1880 | 65485595 ~ 65486068 (-) |
| G1196551 | NA | non-coding | downstream | 2673 | 65485043 ~ 65485275 (-) |
| G1196536 | emp2 | non-coding | downstream | 18179 | 65446633 ~ 65472652 (-) |
| G1196469 | NA | non-coding | downstream | 155466 | 65331581 ~ 65332482 (-) |
| G1196467 | NA | non-coding | downstream | 161582 | 65326089 ~ 65326366 (-) |
| G1196558 | NA | non-coding | upstream | 10704 | 65514096 ~ 65514332 (-) |
| G1196715 | NA | non-coding | upstream | 25704 | 65529096 ~ 65530349 (-) |
| G1196728 | NA | non-coding | upstream | 66211 | 65569603 ~ 65570011 (-) |
| G1196729 | NA | non-coding | upstream | 67096 | 65570488 ~ 65572814 (-) |
| G1196742 | NA | non-coding | upstream | 98258 | 65601650 ~ 65602052 (-) |
| G1196409 | NA | other | downstream | 233870 | 65253279 ~ 65254078 (-) |
| G1196205 | LOC106606311 | other | downstream | 524163 | 64951790 ~ 64963785 (-) |
| G1196208 | NA | other | downstream | 526772 | 64957278 ~ 64961176 (-) |
| G1196113 | NA | other | downstream | 692877 | 64794648 ~ 64795071 (-) |
| G1196797 | NA | other | upstream | 287331 | 65790723 ~ 65795435 (-) |
| G1196818 | NA | other | upstream | 354426 | 65857818 ~ 65859372 (-) |
| G1196805 | NA | other | upstream | 376834 | 65880226 ~ 65920222 (-) |
| G1196890 | NA | other | upstream | 549258 | 66052650 ~ 66053067 (-) |
| G1197903 | LOC106603827 | other | upstream | 864664 | 66368056 ~ 66374151 (-) |
