Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938101 |
| gene name | LOC106603827 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 66220065 ~ 66267701 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036939784.1 | False | 635 | mRNA | 0.50 | 2 | 66220065 | 66222906 |
| TU1367249 | False | 234 | lncRNA | 0.49 | 2 | 66220494 | 66267701 |
| TU1367257 | True | 334 | lncRNA | 0.51 | 3 | 66220560 | 66223099 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938357 | LOC106595583 | coding | downstream | 716673 | 65487948 ~ 65503404 (-) |
| LOC118936529 | LOC105012854 | coding | downstream | 1174604 | 64969176 ~ 65045461 (-) |
| LOC110487107 | LOC106606311 | coding | downstream | 1256242 | 64952654 ~ 64963823 (-) |
| LOC118938356 | NA | coding | downstream | 1265841 | 64951543 ~ 64954224 (-) |
| LOC110487480 | LOC106606286 | coding | downstream | 1274414 | 64798656 ~ 64945651 (-) |
| LOC118938102 | LOC106603753 | coding | upstream | 2244 | 66225150 ~ 66385923 (-) |
| LOC118938480 | NA | coding | upstream | 200691 | 66423597 ~ 66424229 (-) |
| LOC118938476 | LOC106603753 | coding | upstream | 211483 | 66434389 ~ 66435647 (-) |
| LOC110519882 | LOC106603827 | coding | upstream | 454425 | 66677331 ~ 66679483 (-) |
| LOC118938475 | LOC106603827 | coding | upstream | 528886 | 66751792 ~ 66775949 (-) |
| G1197955 | NA | non-coding | downstream | 12467 | 66200750 ~ 66207598 (-) |
| G1197977 | NA | non-coding | downstream | 34353 | 66185512 ~ 66185712 (-) |
| G1197975 | NA | non-coding | downstream | 42037 | 66177325 ~ 66178028 (-) |
| G1197963 | NA | non-coding | downstream | 79877 | 66139544 ~ 66140188 (-) |
| G1196924 | NA | non-coding | downstream | 130850 | 66088963 ~ 66089215 (-) |
| G1197986 | NA | non-coding | upstream | 1214 | 66224120 ~ 66224870 (-) |
| G1197987 | NA | non-coding | upstream | 9978 | 66232884 ~ 66234455 (-) |
| G1197988 | NA | non-coding | upstream | 11685 | 66234591 ~ 66239029 (-) |
| G1197993 | NA | non-coding | upstream | 26028 | 66248934 ~ 66250246 (-) |
| G1198004 | NA | non-coding | upstream | 58844 | 66281750 ~ 66282557 (-) |
| G1196890 | NA | other | downstream | 166998 | 66052650 ~ 66053067 (-) |
| G1196805 | NA | other | downstream | 334460 | 65880226 ~ 65920222 (-) |
| G1196818 | NA | other | downstream | 360693 | 65857818 ~ 65859372 (-) |
| G1196797 | NA | other | downstream | 424630 | 65790723 ~ 65795435 (-) |
| G1197903 | LOC106603827 | other | upstream | 145150 | 66368056 ~ 66374151 (-) |
| G1198140 | NA | other | upstream | 570917 | 66793823 ~ 66852622 (-) |
| G1198179 | NA | other | upstream | 707583 | 66930489 ~ 66936294 (-) |
| LOC118938487 | LOC106581592 | other | upstream | 790084 | 66997539 ~ 67015258 (-) |
| G1198220 | NA | other | upstream | 867837 | 67090743 ~ 67092643 (-) |
| LOC110513226 | LOC106606280 | coding | upstream | 519745 | 66787446 ~ 66789545 (-) |
| G1198006 | NA | non-coding | upstream | 17765 | 66285466 ~ 66287362 (-) |
| G1198008 | NA | non-coding | upstream | 18574 | 66286275 ~ 66329138 (-) |
| G1198010 | NA | non-coding | upstream | 23515 | 66291216 ~ 66647025 (-) |
| G1198012 | NA | non-coding | upstream | 42021 | 66309722 ~ 66310276 (-) |
