Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110485326 |
| gene name | LOC106594247 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 69966663 ~ 69979491 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036942033.1 | False | 2236 | mRNA | 0.56 | 6 | 69966663 | 69979491 |
| TU1370164 | True | 433 | lncRNA | 0.43 | 2 | 69975069 | 69979451 |
69,952,000
69,954,000
69,956,000
69,958,000
69,960,000
69,962,000
69,964,000
69,966,000
69,966,000
69,968,000
69,970,000
69,972,000
69,974,000
69,976,000
69,978,000
69,980,000
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938364 | LOC105012791 | coding | downstream | 57268 | 69878684 ~ 69909395 (-) |
| LOC110487134 | smim22 | coding | downstream | 138032 | 69823493 ~ 69828631 (-) |
| LOC110518542 | LOC105006040 | coding | downstream | 294899 | 69538537 ~ 69671764 (-) |
| LOC118938362 | LOC106602015 | coding | downstream | 428242 | 69535348 ~ 69538421 (-) |
| zgc:103625 | LOC106606248 | coding | downstream | 868063 | 69091435 ~ 69098854 (-) |
| LOC110487114 | LOC106594630 | coding | upstream | 5988 | 69984886 ~ 70019923 (-) |
| zgc:86896 | LOC106606197 | coding | upstream | 50053 | 70029544 ~ 70042528 (-) |
| LOC110487094 | dus1l | coding | upstream | 140692 | 70120183 ~ 70143113 (-) |
| LOC110485314 | LOC105031325 | coding | upstream | 196027 | 70175518 ~ 70255990 (-) |
| scpep1 | LOC106602055 | coding | upstream | 310486 | 70289977 ~ 70306740 (-) |
| G1199940 | NA | non-coding | downstream | 10370 | 69955996 ~ 69956293 (-) |
| G1199928 | NA | non-coding | downstream | 11198 | 69955219 ~ 69955465 (-) |
| G1199938 | NA | non-coding | downstream | 18426 | 69947881 ~ 69948237 (-) |
| G1199937 | NA | non-coding | downstream | 18849 | 69947523 ~ 69947814 (-) |
| G1199935 | NA | non-coding | downstream | 22234 | 69944187 ~ 69944429 (-) |
| G1199924 | NA | non-coding | upstream | 9087 | 69988578 ~ 69989095 (-) |
| G1199959 | NA | non-coding | upstream | 23337 | 70002828 ~ 70003436 (-) |
| G1199960 | NA | non-coding | upstream | 25684 | 70005175 ~ 70005732 (-) |
| G1199977 | NA | non-coding | upstream | 43706 | 70023197 ~ 70023727 (-) |
| G1199912 | LOC105012792 | other | downstream | 41113 | 69924869 ~ 69925550 (-) |
| G1199212 | NA | other | downstream | 600440 | 69363667 ~ 69366223 (-) |
| G1199205 | NA | other | downstream | 612715 | 69352481 ~ 69353948 (-) |
| G1199170 | NA | other | downstream | 690889 | 69270006 ~ 69275774 (-) |
| G1200003 | NA | other | upstream | 90334 | 70069825 ~ 70070259 (-) |
| G1200016 | LOC105899958 | other | upstream | 114604 | 70094095 ~ 70107515 (-) |
| G1199973 | NA | other | upstream | 186505 | 70165996 ~ 70167917 (-) |
| G1200151 | NA | other | upstream | 485053 | 70464544 ~ 70509167 (-) |
| G1200257 | NA | other | upstream | 795951 | 70775442 ~ 70775785 (-) |
