Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110485311 |
| gene name | LOC106606205 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 70044341 ~ 70063866 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cAMP-dependent protein kinase type I-alpha regulatory subunit-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036942039.1 | False | 3819 | mRNA | 0.49 | 11 | 70044341 | 70063866 |
| TU1369442 | False | 330 | TUCP | 0.52 | 3 | 70044407 | 70050732 |
| TU1369443 | False | 314 | TUCP | 0.53 | 3 | 70044407 | 70050387 |
| TU1369473 | True | 602 | lncRNA | 0.57 | 1 | 70061190 | 70061791 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938105 | NA | coding | upstream | 86917 | 69956870 ~ 69957424 (+) |
| LOC118938365 | LOC105012792 | coding | upstream | 89573 | 69910880 ~ 69954768 (+) |
| LOC110487123 | cog1 | coding | upstream | 172500 | 69828557 ~ 69871841 (+) |
| LOC118938363 | NA | coding | upstream | 220476 | 69821174 ~ 69823906 (+) |
| LOC110487135 | rogdi | coding | upstream | 223260 | 69801336 ~ 69821081 (+) |
| LOC110485310 | LOC106535622 | coding | downstream | 4304 | 70068170 ~ 70080888 (+) |
| LOC118938366 | NA | coding | downstream | 17733 | 70080997 ~ 70086161 (+) |
| LOC110485309 | tigd1 | coding | downstream | 24701 | 70088567 ~ 70090545 (+) |
| LOC110487085 | LOC106606200 | coding | downstream | 30117 | 70093983 ~ 70117819 (+) |
| LOC110487092 | LOC105031326 | coding | downstream | 91187 | 70155053 ~ 70167724 (+) |
| G1199440 | NA | non-coding | upstream | 14346 | 70029480 ~ 70029995 (+) |
| G1199473 | NA | non-coding | upstream | 32989 | 70010657 ~ 70011352 (+) |
| G1199468 | NA | non-coding | upstream | 40900 | 70002813 ~ 70003441 (+) |
| G1199460 | NA | non-coding | upstream | 55174 | 69988562 ~ 69989167 (+) |
| G1199459 | NA | non-coding | upstream | 58546 | 69984885 ~ 69985795 (+) |
| G1199438 | NA | non-coding | downstream | 1160 | 70065026 ~ 70066693 (+) |
| G1199437 | NA | non-coding | downstream | 2976 | 70066842 ~ 70067734 (+) |
| G1199491 | NA | non-coding | downstream | 24462 | 70088328 ~ 70088533 (+) |
| G1199495 | NA | non-coding | downstream | 49977 | 70113843 ~ 70114115 (+) |
| G1198885 | LOC100194703 | other | upstream | 870245 | 69173581 ~ 69174096 (+) |
| LOC110487121 | LOC106606247 | other | upstream | 905698 | 69129372 ~ 69148253 (+) |
| G1198855 | NA | other | upstream | 989463 | 69053075 ~ 69054878 (+) |
| LOC110539059 | LOC106606233 | other | upstream | 1036983 | 69000951 ~ 69007573 (+) |
| G1199618 | NA | other | downstream | 426886 | 70490752 ~ 70491983 (+) |
| G1199589 | LOC106606316 | other | downstream | 541271 | 70605137 ~ 70627178 (+) |
| G1200355 | NA | other | downstream | 1089738 | 71153604 ~ 71154711 (+) |
| LOC110485311 | LOC106606205 | other | upstream | 10458 | 70044341 ~ 70063866 (+) |
