Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110538810 |
| gene name | LOC106602038 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 70551969 ~ 70559055 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| mpv17-like protein |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| K13349 | MPV17L; Mpv17-like protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021625787.2 | False | 3039 | mRNA | 0.44 | 5 | 70551969 | 70559055 |
| XM_021625789.2 | False | 2794 | mRNA | 0.45 | 5 | 70551969 | 70559055 |
| XM_036942060.1 | False | 3336 | mRNA | 0.44 | 4 | 70551969 | 70559055 |
| XR_005035663.1 | False | 3264 | mRNA | 0.44 | 5 | 70551969 | 70559055 |
| XR_005035664.1 | False | 3227 | mRNA | 0.44 | 5 | 70551969 | 70559055 |
| XR_005035665.1 | False | 3237 | mRNA | 0.44 | 5 | 70551969 | 70559055 |
| XR_005035666.1 | False | 3237 | mRNA | 0.44 | 5 | 70551969 | 70559055 |
| XR_005035667.1 | False | 3137 | mRNA | 0.44 | 5 | 70551969 | 70559055 |
| XR_005035668.1 | False | 3137 | mRNA | 0.44 | 5 | 70551969 | 70559055 |
| XR_005035669.1 | False | 2993 | mRNA | 0.44 | 5 | 70551969 | 70559055 |
| XM_021625788.2 | True | 2966 | mRNA | 0.44 | 5 | 70551971 | 70559055 |
70,543,000
70,544,000
70,545,000
70,546,000
70,547,000
70,548,000
70,549,000
70,550,000
70,551,000
70,552,000
70,553,000
70,554,000
70,555,000
70,556,000
70,557,000
70,558,000
70,559,000
70,560,000
70,561,000
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519516 | LOC106601962 | coding | upstream | 43893 | 70471423 ~ 70508076 (+) |
| LOC110538806 | NA | coding | upstream | 90612 | 70455689 ~ 70461357 (+) |
| LOC118938367 | LOC106606268 | coding | upstream | 132279 | 70321429 ~ 70419690 (+) |
| LOC118938106 | LOC106602057 | coding | upstream | 230968 | 70311372 ~ 70321001 (+) |
| LOC110539075 | engase | coding | upstream | 262189 | 70266550 ~ 70289780 (+) |
| LOC110538798 | LOC106601995 | coding | downstream | 20375 | 70579430 ~ 70591367 (+) |
| LOC110539051 | LOC106606316 | coding | downstream | 46063 | 70605118 ~ 70624736 (+) |
| LOC118938368 | NA | coding | downstream | 65808 | 70624863 ~ 70630060 (+) |
| LOC110515631 | LOC106601999 | coding | downstream | 155820 | 70714875 ~ 70782765 (+) |
| LOC110538790 | LOC106601922 | coding | downstream | 240800 | 70799855 ~ 70809117 (+) |
| G1199626 | NA | non-coding | upstream | 6652 | 70532289 ~ 70545317 (+) |
| G1199632 | NA | non-coding | upstream | 9939 | 70540233 ~ 70542030 (+) |
| G1199603 | NA | non-coding | upstream | 108422 | 70442734 ~ 70443547 (+) |
| G1199601 | NA | non-coding | upstream | 114892 | 70435380 ~ 70437077 (+) |
| G1199637 | NA | non-coding | downstream | 338 | 70559393 ~ 70560898 (+) |
| G1199648 | NA | non-coding | downstream | 6646 | 70565701 ~ 70565979 (+) |
| G1199649 | NA | non-coding | downstream | 10216 | 70569271 ~ 70570927 (+) |
| G1199650 | NA | non-coding | downstream | 12007 | 70571062 ~ 70572960 (+) |
| G1199651 | NA | non-coding | downstream | 13995 | 70573050 ~ 70573320 (+) |
| G1199618 | NA | other | upstream | 59986 | 70490752 ~ 70491983 (+) |
| LOC118938366 | NA | other | upstream | 465808 | 70080997 ~ 70086161 (+) |
| LOC110485310 | LOC106535622 | other | upstream | 471097 | 70068170 ~ 70080888 (+) |
| LOC110485311 | LOC106606205 | other | upstream | 501237 | 70044341 ~ 70063866 (+) |
| LOC110487135 | rogdi | other | upstream | 731711 | 69801336 ~ 69821081 (+) |
| G1199589 | LOC106606316 | other | downstream | 46082 | 70605137 ~ 70627178 (+) |
| G1200355 | NA | other | downstream | 594549 | 71153604 ~ 71154711 (+) |
| LOC118936530 | fa86a | other | downstream | 1094136 | 71652973 ~ 71657389 (+) |
| G1200756 | NA | other | downstream | 1174140 | 71733195 ~ 71743181 (+) |
| LOC118938376 | LOC106597406 | other | downstream | 1286508 | 71845013 ~ 71891083 (+) |
