LOC118938108


Basic Information

Item Value
gene id LOC118938108
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 72201402 ~ 72205982 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939800.1
ATGAacacaatcatcatcatcactagaaCCACACAGacccaatcatcatcatcactagaaCCACACAGACCCAGTCATCAAACAATATTCTTACATTGTGTACAAATTCATCCCAGTGTCTGTTATTTATTTGTGATTGTCTGTATACTACATCCCAGTGTCTGTTATTTATTTGTGATTGTCTGTATACTACATCCCAGTAGTGTCTGTTATTTATTTGTGATTGTCTGTATACTGCATCCCAGTGTCTGTTATTTACTTGTGATTGTCTGTATACTACATCCCAGTGTCTGTCTATTCTACATCCCTCTACATcccagtgtctgtctgtattctacatcccagtgtctgttatttatttgtgattgtctgtatactacatcccagtgtctgtctgtattctacatcccagtgtctgtctgtattcTACATCCCAGTGTCTGTTATTTATTTGTGATTGTCTGTATACTACATCCCAGTAGTGTCTGTTATTTATTTGTGATTGTCTGTATACTACATCCCAGTAGTGTCTGTTATTTATTTGTGATTGTCTGTATACTACATCCCAGTGTCTGTTATTTATTTGTGATTGTCTGTATACTACATCCCAGTAGTGTCTGTTATTTATTTGTGATTGTCTGTATACTGCATCCCAGTGTCTGTTATTTACTTGTGATTGTCTGTATACTACATCCCAGTGTCTGTTATTTATTTGTGATTGTCTGTATACTACATCCCAGTGTCTGTTATTTATTTGTGATTGTCTGTATACTACATCCCAGTAGTGTCTGTTATTTATTTGTGATTGTCTGTATTCTACATCCCAGTAGTGTCTGTTATTTACTTGTGAATGTCTGTATACTACATCCCAGTGTCTGTTATTTATTTGTGATTGTCTGTATACTACATCCCAGTAGTGTCTGTTATTTATTTGTGATTGTCTGTATTCTACATCCCAGTAGTGTCTGTTATTTACTTGTGAATGTCTGTATACTACATCCCAGTGTCTGTTATTTATTTGTGATTGTCTGTATACTACATCCCAGTAGTGTCTGTTATTTACTTGTGATTGTCTGTATACTACATCCCAGTGTCTGTTATTTATTTGTGATTGTCTGTATACTACAAAAATAAAGCATGTGGGACACTTGTCTTTTTTAAAGTCAGCTTTATGTGAATTATAATTTGAATAGGTAAACGTAATAGTATATAGAGCATATAACTAGTTGAATAGACTGGCCTGTTGGATAACTTTTTAAGAATGTCGAATGTACAATCCTAGGCCTACATGTTCTTTACATTACAGATAGCTCGTATGAACGTTAGTTTGACAACGTATCTAACTAGCCCATAGCACGAAAGACTATCAACACGTGGAAGACCACAACAAGTATCACTAAACAGCTGACAAGTTATATCGGCAAAGCACAAATAGGTCGACTAATTTTACCCGCTCTCGGCAGAAAGCACATAAATGAGGGTTACCAAGTTAAAGTAGGCAAACACGTGTGACAACAACTATGAGAGTGTCTCAGACAAAGGTAACATCTGCCAATCTTACCTTGATCCGTCACTGAAAAGTGTACATCGTGATTTCCCGTGGCTGAGAGTCACAATAAGCACAACGTTATCCCG

Function

NR:

description
uncharacterized protein LOC110523079

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939800.1 True 1635 mRNA 0.36 3 72201402 72205982

Neighbor

gene id symbol gene type direction distance location
LOC118938378 sept12 coding downstream 37975 71981149 ~ 72163427 (-)
LOC118938107 NA coding downstream 220128 71978726 ~ 71981274 (-)
LOC110494397 LOC106596483 coding downstream 473263 71690864 ~ 71728139 (-)
LOC110494400 alg1 coding downstream 528857 71657600 ~ 71672545 (-)
LOC110494404 LOC106606254 coding downstream 548498 71616118 ~ 71652904 (-)
LOC110517414 tmem114 coding upstream 540762 72746744 ~ 72796030 (-)
LOC110512991 LOC106592621 coding upstream 701064 72907046 ~ 72934615 (-)
LOC118938382 NA coding upstream 738928 72940912 ~ 72948496 (-)
LOC118938383 natu coding upstream 744743 72950725 ~ 72971489 (-)
LOC110487136 LOC106596253 coding upstream 794921 73000903 ~ 73014178 (-)
G1201105 NA non-coding downstream 6238 72188999 ~ 72195164 (-)
G1201097 NA non-coding downstream 16978 72182793 ~ 72184424 (-)
G1201094 NA non-coding downstream 21129 72179935 ~ 72180273 (-)
G1201092 NA non-coding downstream 42277 72158652 ~ 72159125 (-)
G1201089 NA non-coding downstream 47121 72154063 ~ 72154281 (-)
G1201445 NA non-coding upstream 1972 72207954 ~ 72209007 (-)
G1201451 NA non-coding upstream 28193 72234175 ~ 72234448 (-)
G1201462 NA non-coding upstream 65457 72271439 ~ 72271748 (-)
G1201468 NA non-coding upstream 84204 72290186 ~ 72291311 (-)
G1201473 NA non-coding upstream 107858 72313840 ~ 72314600 (-)
G1201088 NA other downstream 48902 72152114 ~ 72152500 (-)
G1200789 NA other downstream 457427 71741161 ~ 71743975 (-)
G1200790 NA other downstream 466818 71733297 ~ 71734584 (-)
G1201587 NA other upstream 464181 72670163 ~ 72671927 (-)
G1201668 NA other upstream 742599 72948581 ~ 72949745 (-)
G1201724 NA other upstream 771321 72977303 ~ 72977759 (-)
LOC110487137 LOC106606270 other upstream 822485 73017755 ~ 73030221 (-)

Expression

LOC118938108 Expression in all Baseline Samples

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LOC118938108 Expression in each Bioproject

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LOC118938108 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network