G1135355



Basic Information


Item Value
gene id G1135355
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 1382438 ~ 1385803 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1293207
ttttgtgaagaatcaacaacaagtggggcacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgattaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtgtaaagccggatttggatacaaaaatatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaacggcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcatatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtctaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatcttcaatggaatggttcaaaaataaacatatcccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaatttcagtctctcgatgtgcaaaactgatagagacatactccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgagtggtggtgcgcgc

Function


NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1293207 True 1330 TUCP 0.43 2 1382438 1385803

Neighbor


gene id symbol gene type direction distance location
LOC118938132 NA coding upstream 37 1368089 ~ 1382401 (+)
LOC110513328 LOC106595349 coding upstream 17196 1357009 ~ 1365242 (+)
LOC118938502 NA coding upstream 47114 1324822 ~ 1335324 (+)
LOC118938126 NA coding upstream 64046 1312719 ~ 1318392 (+)
LOC118938140 NA coding upstream 97706 1283525 ~ 1284732 (+)
LOC110511566 LOC106593831 coding downstream 3051 1388854 ~ 1402751 (+)
LOC110511565 LOC106593831 coding downstream 20064 1405867 ~ 1417255 (+)
LOC110500805 NA coding downstream 35377 1421180 ~ 1440541 (+)
LOC110506851 LOC106594001 coding downstream 147722 1533525 ~ 1554229 (+)
LOC118938504 LOC106592137 coding downstream 190600 1576403 ~ 1583587 (+)
G1135347 NA non-coding upstream 20176 1361509 ~ 1362262 (+)
G1135108 NA non-coding upstream 64055 875652 ~ 1318383 (+)
G1135114 NA non-coding upstream 73010 1160633 ~ 1309428 (+)
G1135150 NA non-coding upstream 80846 933649 ~ 1301592 (+)
G1135286 NA non-coding upstream 113641 960344 ~ 1268797 (+)
G1135368 NA non-coding downstream 7696 1393499 ~ 1393750 (+)
G1135370 NA non-coding downstream 8920 1394723 ~ 1438596 (+)
G1135373 NA non-coding downstream 28590 1414393 ~ 1414833 (+)
G1135135 NA other upstream 77067 1302239 ~ 1305371 (+)
G1135265 LOC106586052 other upstream 530281 839169 ~ 852157 (+)
LOC118938495 NA other upstream 573760 802023 ~ 810582 (+)
G1135226 NA other upstream 687028 694629 ~ 695410 (+)
LOC118938396 LOC106595654 other downstream 237297 1623073 ~ 1627806 (+)
G1135455 LOC106607538 other downstream 418570 1804373 ~ 1823552 (+)
LOC118938404 LOC106594479 other downstream 529068 1914705 ~ 1935643 (+)
G1135625 NA other downstream 614506 2000309 ~ 2068901 (+)
G1135672 NA other downstream 927050 2282956 ~ 2429608 (+)

Expression



Co-expression Network