Item | Value |
---|---|
gene id | G1135625 |
gene name | NA |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048577.1 |
NCBI id | CM023231.2 |
chromosome length | 73332040 |
location | 2000309 ~ 2068901 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1293599 | False | 554 | TUCP | 0.50 | 3 | 2000309 | 2068901 |
TU1293592 | False | 2813 | lncRNA | 0.46 | 6 | 2034562 | 2038213 |
TU1293594 | False | 2642 | lncRNA | 0.46 | 7 | 2034562 | 2038213 |
TU1293587 | False | 2723 | lncRNA | 0.46 | 6 | 2034638 | 2038213 |
TU1293590 | False | 2995 | lncRNA | 0.45 | 6 | 2034638 | 2038685 |
TU1293591 | False | 1961 | TUCP | 0.46 | 5 | 2034638 | 2036880 |
TU1293593 | False | 1854 | lncRNA | 0.46 | 3 | 2034638 | 2036880 |
TU1293595 | False | 2614 | lncRNA | 0.46 | 5 | 2034638 | 2038213 |
TU1293598 | False | 957 | lncRNA | 0.41 | 3 | 2034638 | 2035720 |
TU1293600 | False | 2237 | lncRNA | 0.46 | 7 | 2034638 | 2038213 |
TU1293603 | True | 1389 | lncRNA | 0.45 | 5 | 2034638 | 2036880 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118938423 | NA | coding | upstream | 32937 | 2000842 ~ 2002464 (+) |
LOC118938395 | LOC106594479 | coding | upstream | 72943 | 1942017 ~ 1961619 (+) |
LOC118938404 | LOC106594479 | coding | upstream | 98919 | 1914705 ~ 1935643 (+) |
LOC110487319 | LOC106592850 | coding | upstream | 129242 | 1901087 ~ 1905320 (+) |
LOC118938410 | LOC106592292 | coding | upstream | 145573 | 1881621 ~ 1888989 (+) |
LOC118938402 | LOC106612417 | coding | downstream | 75469 | 2114154 ~ 2119737 (+) |
LOC118938397 | LOC106612417 | coding | downstream | 111378 | 2150063 ~ 2156275 (+) |
LOC110512827 | LOC106612417 | coding | downstream | 167269 | 2205954 ~ 2213834 (+) |
LOC118938398 | LOC106612417 | coding | downstream | 229962 | 2268647 ~ 2276355 (+) |
LOC110513807 | NA | coding | downstream | 259139 | 2297824 ~ 2398152 (+) |
G1135637 | NA | non-coding | upstream | 3909 | 2029832 ~ 2030653 (+) |
G1135615 | LOC106593708 | non-coding | upstream | 54293 | 1974516 ~ 1980269 (+) |
G1135616 | NA | non-coding | upstream | 57562 | 1975947 ~ 1977000 (+) |
G1135614 | NA | non-coding | upstream | 61496 | 1972859 ~ 1973066 (+) |
G1135658 | NA | non-coding | downstream | 65282 | 2103967 ~ 2104502 (+) |
G1135689 | NA | non-coding | downstream | 126271 | 2164956 ~ 2181047 (+) |
G1135672 | NA | non-coding | downstream | 244271 | 2282956 ~ 2429608 (+) |
G1135767 | NA | non-coding | downstream | 365885 | 2404570 ~ 2427825 (+) |
G1135455 | LOC106607538 | other | upstream | 211010 | 1804373 ~ 1823552 (+) |
LOC118938396 | LOC106595654 | other | upstream | 409086 | 1623073 ~ 1627806 (+) |
G1135355 | NA | other | upstream | 648759 | 1382438 ~ 1385803 (+) |
G1135135 | NA | other | upstream | 729191 | 1302239 ~ 1305371 (+) |
G1136602 | LOC106613263 | other | downstream | 544612 | 2583297 ~ 2584334 (+) |
G1136609 | NA | other | downstream | 561323 | 2600008 ~ 2602694 (+) |
G1136633 | NA | other | downstream | 614676 | 2653361 ~ 2656653 (+) |
G1136677 | LOC106564039 | other | downstream | 689596 | 2728281 ~ 2732015 (+) |
LOC118938408 | LOC106594474 | coding | upstream | 121710 | 1858020 ~ 1878599 (+) |
G1135600 | NA | non-coding | upstream | 103148 | 1896942 ~ 1897161 (+) |