G1136398


Basic Information

Item Value
gene id G1136398
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 2000877 ~ 2002464 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1294615
gagagagaacgaacaAAAGTTGACAGGATGGAACACTACCTCTGTCTGATGACCGtagaacagacaggatggaaCACTACCTCTGTCTGATGACCGtagaacagacaggatggaaCACTGACAACACTCATATTGCTGTGCAGAACAGTATAGAATtgatctgtctgtctttctctgtctgttcagtttgTTTCCTGGAAGCTTaaatgacccctgacctctgtcgAGAGCCAATGACAGACCCAGATCCAGTGTAGCTGTCCGACCTGGCATCCAATAAGCTGGCTCCCTTTTGTTTTCTGTTACAAAAGCCCTCTCTTTTAAGATGTTGTGTTGTTCTGCTGACTGACCTCTAGTAACTCTTAGTCGGCCCTCACACTGTCTATAATAAATACACTGACTAACCTCTAGTAGCTCTTAGTCTGCCCTCACACTGTCTATAATAAATACACTGACTAACCTCTAGTAGCTCTTAGTCTGTTTATAATAAATACACTGACTAACCTCTAGTAGCTcttagtctgtctataataaatacACTGACTAACCTCTAGTAACTcttagtctgtctataataaatacACTGACCTACCTCTAGTAACTcttagtctgtctataataaatacACTGACTAACCTCTAGTAACTCTTAGTCTGCCCTCACACTGTCTATAATAAATACACTGACTAACCTCTAGTAGCTcttagtctgtctataataaatacACTGACTAACCTCTAGTAACTCTTAGTCGGCCCTCACACTGTCTATAATAAATATGAGTTTGAAATGGGACATAACTTACATTTCTGTGACATTATGAAATGATTTCTACTGTTCCTGTGTTTTTTTATAGTGTTTCTGTGTTTTGTAAACTAGGCTACAGTAATAAAAACATCTCAGC
>TU1294617
gagagagaacgaacaAAAGTTGACAGGATGGAACACTACCTCTGTCTGATGACCGtagaacagacaggatggaaCACTACCTCTGTCTGATGACCGtagaacagacaggatggaaCACTGACAACACTCATATTGCTGTGCAGAACAGTATAGAATtgatctgtctgtctttctctgtctgttcagtttgTTTCCTGGAAGCTTaaatgacccctgacctctgtcgAGAGCCAATGACAGACCCAGATCCAGTGTAGCTGTCCGACCTGGCATCCAATAAGCTGGCTCCCTTTTGTTTTCTGTTACAAAAGCCCTCTCTTTTAAGATGTTGTGTTGTTCTGCTGACTGACCTCTAGTAACTCTTAGTCGGCCCTCACACTGTCTATAATAAATACACTGACTAACCTCTAGTAGCTCTTAGTCTGCCCTCACACTGTCTATAATAAATACACTGACTAACCTCTAGTAGCTCTTAGTCTGTTTATAATAAATACACTGACTAACCTCTAGTAGCTcttagtctgtctataataaatacACTGACTAACCTCTAGTAACTcttagtctgtctataataaatacACTGACTAACCTCTAGTAACTCTTAGTCTGCCCTCACACTGTCTATAATAAATACACTGACCTACCTCTAGTAACTcttagtctgtctataataaatacACTGACCTACCTCTAGTAACTcttagtctgtctataataaatacACTGACTAACCTCTAGTAACTCTTAGTCTGCCCTCACACTGTCTATAATAAATACACTGACTAACCTCTAGTAGCTcttagtctgtctataataaatacACTGACTAACCTCTAGTAACTCTTAGTCGGCCCTCACACTGTCTATAATAAATATGAGTTTGAAATGGGACATAACTTACATTTCTGTGACATTATGAAATGATTTCTACTGTTCCTGTGTTTTTTTATAGTGTTTCTGTGTTTTGTAAACTAGGCTACAGTAATAAAAACATCTCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1294615 False 904 lncRNA 0.39 4 2000877 2002464
TU1294617 True 1003 lncRNA 0.39 5 2000877 2002464

Neighbor

gene id symbol gene type direction distance location
LOC110487301 LOC106595892 coding downstream 4845 1938873 ~ 1996032 (-)
LOC118938418 NA coding downstream 258765 1740498 ~ 1742112 (-)
LOC110487338 NA coding downstream 266771 1719750 ~ 1734106 (-)
trnai-uau-3 NA coding downstream 290873 1709911 ~ 1710004 (-)
LOC110487328 NA coding downstream 329421 1668582 ~ 1671456 (-)
LOC118938506 LOC106594488 coding upstream 85 2002549 ~ 2010728 (-)
LOC110515515 LOC106563994 coding upstream 28344 2030808 ~ 2096917 (-)
LOC118938422 LOC106594299 coding upstream 100770 2103128 ~ 2104021 (-)
LOC118938405 NA coding upstream 126468 2128932 ~ 2141322 (-)
LOC118938409 NA coding upstream 162533 2164997 ~ 2170791 (-)
G1136396 NA non-coding downstream 1505 1998885 ~ 1999372 (-)
G1136395 NA non-coding downstream 3613 1996925 ~ 1997264 (-)
G1136368 NA non-coding downstream 99315 1901122 ~ 1901562 (-)
G1136365 NA non-coding downstream 103712 1896932 ~ 1897165 (-)
G1136416 NA non-coding upstream 88023 2090487 ~ 2091614 (-)
G1136417 NA non-coding upstream 91262 2093726 ~ 2095171 (-)
G1136419 NA non-coding upstream 97061 2099525 ~ 2100002 (-)
LOC110506157 LOC106593263 other downstream 435468 1562605 ~ 1565409 (-)
LOC110500808 LOC106592918 other downstream 469369 1524636 ~ 1531929 (-)
LOC118938134 NA other downstream 545572 1454762 ~ 1458002 (-)
G1136432 LOC106595012 other upstream 127254 2129718 ~ 2170439 (-)
G1136447 NA other upstream 169186 2171650 ~ 2187711 (-)
G1136455 NA other upstream 184976 2187440 ~ 2245318 (-)
LOC118938509 LOC106564044 other upstream 505799 2507219 ~ 2518648 (-)

Expression


Co-expression Network