G1136448


Basic Information

Item Value
gene id G1136448
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 2173124 ~ 2174163 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1294685
ccctgattctatgatattcaccaggttaccgaacagaaccctgattctatgatattcaccaggttacctaacagaaccctggttctatgatatttaccaggttacctaacagaaccctgattctatgatattcaccaggttacctaacagaaccctgattctatgatattcaccaggttacctaacagaaccctgattctatgatattcaccaggttacctaacagaaccctgattctatgatattcaccaggttacctaacagaaccctggttctatgatattcaccaggttacctaacataaccctgattctatgatattcaccaggttacctaacagaaccctgattctatgatattcaccaggttacctaacagaaccctgattctatgatattcaccaggttacctaacagaaccctggttctatgatattcaccaggttacctaacagaaccctggttctatgatattcaccaggttacctaacagaaccctgattctatgatattcaccaggttacctaacagaaccctggttctatgatattcaccaggttacctaacagaaccctgattctatgatattcaccaggttaccttTCACACATGGAAGACAAACACGTACTTAGATGTGAAGATGGGAGCGACTATGTCCCTTACATAGGAAGTGGAGTCGTCTGCTATTAGCTGTTGCGTGACAGACGTTGTTTGATTGGATCTCCCTAGACTCCGCCCCTAACGAGGCTTATAATATCATAGAACAGATGTTATGTTAGGTAACCTTAAGTTACATGTCCTACTATGCTAATG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106591801

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1294685 True 812 lncRNA 0.41 2 2173124 2174163

Neighbor

gene id symbol gene type direction distance location
LOC118938409 NA coding downstream 2333 2164997 ~ 2170791 (-)
LOC118938405 NA coding downstream 31802 2128932 ~ 2141322 (-)
LOC118938422 LOC106594299 coding downstream 69103 2103128 ~ 2104021 (-)
LOC110515515 LOC106563994 coding downstream 76207 2030808 ~ 2096917 (-)
LOC118938506 LOC106594488 coding downstream 162396 2002549 ~ 2010728 (-)
LOC110513814 LOC106564064 coding upstream 19959 2194122 ~ 2243480 (-)
LOC118938412 LOC106564064 coding upstream 77489 2251652 ~ 2259183 (-)
LOC118936483 NA coding upstream 110492 2284655 ~ 2292145 (-)
LOC118938507 NA coding upstream 162120 2336283 ~ 2375402 (-)
LOC118938413 NA coding upstream 177572 2351735 ~ 2360192 (-)
G1136419 NA non-coding downstream 73122 2099525 ~ 2100002 (-)
G1136417 NA non-coding downstream 77953 2093726 ~ 2095171 (-)
G1136416 NA non-coding downstream 81510 2090487 ~ 2091614 (-)
G1136481 NA non-coding upstream 33887 2208050 ~ 2208717 (-)
G1136475 NA non-coding upstream 82920 2257083 ~ 2257797 (-)
G1136489 NA non-coding upstream 94104 2268267 ~ 2296934 (-)
G1136494 NA non-coding upstream 104920 2279083 ~ 2307332 (-)
G1136506 NA non-coding upstream 149517 2323680 ~ 2418197 (-)
G1136432 LOC106595012 other downstream 2685 2129718 ~ 2170439 (-)
LOC110487301 LOC106595892 other downstream 187721 1938873 ~ 1996032 (-)
LOC110487328 NA other downstream 502085 1668582 ~ 1671456 (-)
LOC110506157 LOC106593263 other downstream 607715 1562605 ~ 1565409 (-)
G1136455 NA other upstream 13277 2187440 ~ 2245318 (-)
LOC118938509 LOC106564044 other upstream 334100 2507219 ~ 2518648 (-)
G1136568 NA other upstream 347664 2521827 ~ 2522361 (-)
G1136948 NA other upstream 684868 2859031 ~ 2860041 (-)
G1137174 NA other upstream 955450 3129613 ~ 3130553 (-)

Expression


Co-expression Network