G1136475



Basic Information


Item Value
gene id G1136475
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 2257083 ~ 2257797 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1294734
cagataaacatggtaccttcaggcgtttggaaattgctcccaaggataaaccagacttgtagaggtctacattttcttttctgatgtcttggctgatttcttttgattttcccataatgtcaagcaaagaggcactgagtttgaaggtaggcctttgaaatacatccacaggtacacctccaattggctcaattgatgtcaattagcctatcagaagcttctaaagccataacataataattttcgggaattttccaagctgtttaaaggcacagtcaacttagtgtatgtaaactcctgacccactggagttgtgatacagtgaattataagtgaaatatgacatttgtggagtggttgaaaaactagttttgatGACTTAGTTTTGTTGCTTACAGTTTAGTTTCCTCCACTGTCCCCATACTGGACTCAAACTAGTGATCATCTGCTTCTCATCACATGTGACCGCTCTCCTTGACAATGAACCGCTGGAGCGATACAAAAGGTACCAGTTGGACAGCTCCATCTGTGACGTTTCAAGCTGTGGAGTGAGTTTAAAAGGTACCAGTTGGACAGCTCCATCTGTGACGTTTCAAGCTGTGGAGTGAGTTTACGGCACGTTCTCACCTCCGTTACACATGTTCAGGTTGACTTTCCCA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1294734 True 659 lncRNA 0.42 2 2257083 2257797

Neighbor


gene id symbol gene type direction distance location
LOC110513814 LOC106564064 coding downstream 13603 2194122 ~ 2243480 (-)
LOC118938409 NA coding downstream 86292 2164997 ~ 2170791 (-)
LOC118938405 NA coding downstream 115761 2128932 ~ 2141322 (-)
LOC118938422 LOC106594299 coding downstream 153062 2103128 ~ 2104021 (-)
LOC110515515 LOC106563994 coding downstream 160166 2030808 ~ 2096917 (-)
LOC118936483 NA coding upstream 26858 2284655 ~ 2292145 (-)
LOC118938507 NA coding upstream 78486 2336283 ~ 2375402 (-)
LOC118938413 NA coding upstream 93938 2351735 ~ 2360192 (-)
LOC110518365 NA coding upstream 122299 2380096 ~ 2431119 (-)
LOC118938508 NA coding upstream 186646 2444443 ~ 2468862 (-)
G1136444 NA non-coding downstream 42818 2156328 ~ 2214265 (-)
G1136481 NA non-coding downstream 48366 2208050 ~ 2208717 (-)
G1136447 NA non-coding downstream 69372 2171650 ~ 2187711 (-)
G1136446 NA non-coding downstream 76652 2164682 ~ 2180431 (-)
G1136448 NA non-coding downstream 82920 2173124 ~ 2174163 (-)
G1136489 NA non-coding upstream 10470 2268267 ~ 2296934 (-)
G1136494 NA non-coding upstream 21286 2279083 ~ 2307332 (-)
G1136506 NA non-coding upstream 65883 2323680 ~ 2418197 (-)
LOC118938509 LOC106564044 non-coding upstream 249694 2507219 ~ 2518648 (-)
G1136565 NA non-coding upstream 263001 2520798 ~ 2521112 (-)
G1136455 NA other downstream 11765 2187440 ~ 2245318 (-)
G1136432 LOC106595012 other downstream 86644 2129718 ~ 2170439 (-)
LOC110487301 LOC106595892 other downstream 271680 1938873 ~ 1996032 (-)
G1136568 NA other upstream 264030 2521827 ~ 2522361 (-)
G1136948 NA other upstream 601234 2859031 ~ 2860041 (-)
G1137174 NA other upstream 871816 3129613 ~ 3130553 (-)
LOC110514041 LOC106585204 other upstream 903482 3161191 ~ 3197982 (-)

Expression



Co-expression Network