G1136489


Basic Information

Item Value
gene id G1136489
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 2268267 ~ 2296934 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1294753
agggCCGTTCCACAAAATGGGGGCATTTTGCGTCcacttgatattttaagtagaaatgcactgtatatgatatTTTAAAACCCGGCTATACTAGAATaagtgcactttaatatagaccacatagaGAATTCAATAAATCCATTTTTGAAGTTCCAAAAATATATGTACCAATGGCAGATTGCCCCTTAATaaacaattcctacagtactgaacaacatattcaagtgtagaacttcagtataatgcccctttaaaaacaactgcatagtttgtgcccgtttttaagacagtactcactggtggtAATCGGATCTTCAGTCTCATttttcactcccaaaacgtcttcctcttTTATTGAGATATCCTCCTCTTTTACTCCAAAAgggtcttcctcctctttcaaTTTTACGGCATCTTCCTCCTTTTTGATTCTGAAAGCTTCTACCTCTTTTTCCACTTTGACAACCTCGTTCCCATAttcctctttcactgtaatatcatcCTCTTGTTTCAATGTGATAGCCTCCATATTCATTCTTCAAGCTTCTTTGCCTCCTTTCACCAGTTTCTTTCTCCGTCTAGATTAGTGAGTTTATGCTCCGGGAGATTAGCCTAGTGCAGTATCAATGTAACACATTTGCTAATTTAACAAGCAAATTACGTTTAAATGAACCAGTAGATATGTAAACAGAATTATGTTGAAAACACTAAGAGTAATATACACAAGATTGGTCTAAAGAGCTCCAATGTTTCGGTTTTAGGTTTGCTAGCAAGGCACAGCGTGGTTAAATCAGAAGCCTTTTGTCGCTTGTTGAAGAAGCCTCCtgtcccgtccactagattatacgtcacgcaagaagcatcacctgaaaaattaatatcgccatctgctgactggagtgggtaacgcagactGGAAAATATGAACTACAATGTTCAGTCTGGCAAGCAATGTCATAAGAAGTCATTTAAAAATAACCAGATGTTATGTTCTTACTTCTTACAGCCAATACTTTCCTCCAGGATTGGCCTGCCTATTAGGCAGGATTAGgtatgtatatagactctcttttttttctactgtgttattgacttgttaattgtttactccatgtgtaactctgtgttgtctattcacactgctatgctttatcttggccaggtcgcagttgtaaatg

Function

NR:

description
zinc finger protein 239-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1294753 True 1178 lncRNA 0.38 2 2268267 2296934

Neighbor

gene id symbol gene type direction distance location
LOC118938412 LOC106564064 coding downstream 9084 2251652 ~ 2259183 (-)
LOC110513814 LOC106564064 coding downstream 24787 2194122 ~ 2243480 (-)
LOC118938409 NA coding downstream 97476 2164997 ~ 2170791 (-)
LOC118938405 NA coding downstream 126945 2128932 ~ 2141322 (-)
LOC118938422 LOC106594299 coding downstream 164246 2103128 ~ 2104021 (-)
LOC118938507 NA coding upstream 39349 2336283 ~ 2375402 (-)
LOC118938413 NA coding upstream 54801 2351735 ~ 2360192 (-)
LOC110518365 NA coding upstream 83162 2380096 ~ 2431119 (-)
LOC118938508 NA coding upstream 147509 2444443 ~ 2468862 (-)
LOC110493356 LOC106592333 coding upstream 184674 2481608 ~ 2492020 (-)
G1136475 NA non-coding downstream 10470 2257083 ~ 2257797 (-)
G1136444 NA non-coding downstream 54002 2156328 ~ 2214265 (-)
G1136481 NA non-coding downstream 59550 2208050 ~ 2208717 (-)
G1136447 NA non-coding downstream 80556 2171650 ~ 2187711 (-)
G1136446 NA non-coding downstream 87836 2164682 ~ 2180431 (-)
G1136506 NA non-coding upstream 26746 2323680 ~ 2418197 (-)
LOC118938509 LOC106564044 non-coding upstream 210557 2507219 ~ 2518648 (-)
G1136565 NA non-coding upstream 223864 2520798 ~ 2521112 (-)
G1136783 NA non-coding upstream 226972 2523906 ~ 2536759 (-)
G1136788 LOC106564059 non-coding upstream 233541 2530475 ~ 2556166 (-)
G1136455 NA other downstream 22949 2187440 ~ 2245318 (-)
G1136432 LOC106595012 other downstream 97828 2129718 ~ 2170439 (-)
LOC110515515 LOC106563994 other downstream 171383 2030808 ~ 2096917 (-)
LOC110487301 LOC106595892 other downstream 282864 1938873 ~ 1996032 (-)
G1136568 NA other upstream 224893 2521827 ~ 2522361 (-)
G1136948 NA other upstream 562097 2859031 ~ 2860041 (-)
G1137174 NA other upstream 832679 3129613 ~ 3130553 (-)
LOC110514041 LOC106585204 other upstream 864345 3161191 ~ 3197982 (-)

Expression


Co-expression Network