Gene
RNA
| Item | Value |
|---|---|
| gene id | G1137111 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 2991341 ~ 3014244 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| vascular cell adhesion protein 1-like |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1295564 | True | 219 | lncRNA | 0.55 | 2 | 2991341 | 3014244 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514903 | LOC106594799 | coding | downstream | 23554 | 2941965 ~ 2967787 (-) |
| LOC110493365 | LOC106564074 | coding | downstream | 195039 | 2789766 ~ 2796302 (-) |
| LOC110493340 | LOC106564070 | coding | downstream | 203812 | 2782314 ~ 2787529 (-) |
| LOC110493346 | LOC106564071 | coding | downstream | 210022 | 2773980 ~ 2781319 (-) |
| LOC118938421 | NA | coding | downstream | 218092 | 2771785 ~ 2773249 (-) |
| LOC110493360 | LOC106564102 | coding | upstream | 118759 | 3133003 ~ 3158838 (-) |
| LOC110514041 | LOC106585204 | coding | upstream | 146947 | 3161191 ~ 3197982 (-) |
| LOC118938425 | NA | coding | upstream | 147402 | 3161646 ~ 3162575 (-) |
| LOC110519358 | LOC106564100 | coding | upstream | 324784 | 3337677 ~ 3341727 (-) |
| LOC118938390 | LOC106585183 | coding | upstream | 338922 | 3353166 ~ 3370727 (-) |
| G1137104 | NA | non-coding | downstream | 1219 | 2989842 ~ 2990122 (-) |
| G1137102 | NA | non-coding | downstream | 5763 | 2984777 ~ 2985578 (-) |
| G1137099 | NA | non-coding | downstream | 15499 | 2975493 ~ 2975842 (-) |
| G1137097 | NA | non-coding | downstream | 18055 | 2972721 ~ 2973286 (-) |
| G1137095 | NA | non-coding | downstream | 19660 | 2971415 ~ 2971681 (-) |
| G1137106 | LOC106564107 | non-coding | upstream | 273 | 3014517 ~ 3074478 (-) |
| G1137109 | NA | non-coding | upstream | 2879 | 3017123 ~ 3018300 (-) |
| G1137130 | NA | non-coding | upstream | 6191 | 3020435 ~ 3022262 (-) |
| G1137148 | NA | non-coding | upstream | 64747 | 3078991 ~ 3080699 (-) |
| G1137147 | NA | non-coding | upstream | 69150 | 3083394 ~ 3084944 (-) |
| G1136948 | NA | other | downstream | 131300 | 2859031 ~ 2860041 (-) |
| G1136568 | NA | other | downstream | 468980 | 2521827 ~ 2522361 (-) |
| LOC118938509 | LOC106564044 | other | downstream | 476423 | 2507219 ~ 2518648 (-) |
| G1136455 | NA | other | downstream | 746023 | 2187440 ~ 2245318 (-) |
| G1136447 | NA | other | downstream | 803630 | 2171650 ~ 2187711 (-) |
| G1137174 | NA | other | upstream | 115369 | 3129613 ~ 3130553 (-) |
| LOC110487308 | LOC106595461 | other | upstream | 514195 | 3521685 ~ 3532141 (-) |
| G1137666 | NA | other | upstream | 717377 | 3731621 ~ 3733300 (-) |
| G1137672 | LOC106595836 | other | upstream | 751038 | 3765282 ~ 3765816 (-) |
