G1137472 (LOC106594097)


Basic Information

Item Value
gene id G1137472
gene name LOC106594097
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 3477705 ~ 3484262 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1296102
CACAGAGCACTGGTAAGGCCTCTCTCCCGTGTGTGTTCTCACGTGTCTCTCCAGTTTGTTTGCTTGTGTGAACTCCTTCCCACAGTCCGGACACTTGTGAAACCTCTTCGGTTGCCGTCGTTCTTCTCCCCCGGAACAGTTGAATCGCTCGTGGGTCATCAGGAGTCCTTTACTGATGAAGCCCTTGCCACACTCAGAGCAGAGGAAAGGCATCTCTCCTGTGTGCGTTCGCTCGTGGACTTTTAACGTATACTTACTAGAGCAGGTCCGTCCGCACACGGAGCACAGGGGCTTCTCCTCGGTGTGCGTTCGCTCGTGGGCTTTCCAAGCCGGTTTGTGGTAGTAACCCTTGCCACAGAAAGAGCAAGAGTAAGGCATCTCTCCTGTGTGGGATCGCTGGTGTTCTTTCAATGATTCTTTATTGAACCTCTtgccacacacacagcaggtgTAAGGCTTGGCTCCCGTGTCCGTCTTCAAGTGAACCTCCAGAACGCACTTTGAGGAGAACTCTTGTCCACAGCAGCAGGTCACCTTGTCGGCTGAGTCTTTCTTCTGGTGTAATCTCAAGCTACTTTGATAAGTGAAGCCCTTCCCACACTCAGAGCAgaggtaaggcttctctccggtgTGGATTCTCTGGTGGACCTTCAGTGCTGATAACGATGGGCAGTGTCTCCCACACTCGGGGCAGGAGTGGGTCTTCCTGACTCCCCATTTCCTCTTCTGTTGTTCAGGTTCTCCTGAAGCAGGACTCTGTCTTTTACTCTTCTCTGTCGCCTctcctgtgtgtgtactgttctccgtctcctctcctgtgtgtgtcctgttcTGGTGTCTCCTTAGTGTGTACAAGGAGACAAACTTCCTCCCACACGCTAGGCAGCAGTGAGTCTTAGTTTTGCGTTTCGCTCGTCGTTGTTCAGGTTCTTCCGATTCGGAATGTTCAGGATCTTCGTATTCGGAATGTTCAGGATCTTCGGATTCGGAATGTTCTGGTTCTTCCGATGAAGAGGGACTATATTCACTGGCAGACGGTTGGTTGG

Function

NR:

description
zinc finger protein 34-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1296102 True 1046 lncRNA 0.52 2 3477705 3484262

Neighbor

gene id symbol gene type direction distance location
LOC110487174 LOC106594426 coding downstream 57584 3414022 ~ 3420121 (-)
LOC110487344 LOC106594449 coding downstream 71122 3387801 ~ 3406583 (-)
LOC118938420 NA coding downstream 92664 3382292 ~ 3385041 (-)
LOC118938390 LOC106585183 coding downstream 106978 3353166 ~ 3370727 (-)
LOC110519358 LOC106564100 coding downstream 135978 3337677 ~ 3341727 (-)
LOC110487303 LOC106593981 coding upstream 24020 3508282 ~ 3513160 (-)
LOC110487308 LOC106595461 coding upstream 37423 3521685 ~ 3532141 (-)
LOC110517154 LOC106594599 coding upstream 49246 3533508 ~ 3554061 (-)
LOC110524887 LOC106564116 coding upstream 88700 3572962 ~ 3584380 (-)
LOC118938144 NA coding upstream 214482 3698309 ~ 3705039 (-)
G1137487 NA non-coding downstream 5896 3471479 ~ 3471809 (-)
G1137483 NA non-coding downstream 9798 3467476 ~ 3467907 (-)
G1137461 NA non-coding downstream 30351 3440439 ~ 3447354 (-)
G1137444 NA non-coding downstream 82083 3395376 ~ 3395622 (-)
G1137404 LOC106564108 non-coding downstream 83600 3382263 ~ 3394105 (-)
G1137506 NA non-coding upstream 21371 3505633 ~ 3506353 (-)
G1137527 NA non-coding upstream 66291 3550553 ~ 3551804 (-)
G1137528 NA non-coding upstream 72688 3556950 ~ 3557949 (-)
G1137542 NA non-coding upstream 113099 3597361 ~ 3598381 (-)
LOC110514041 LOC106585204 other downstream 289521 3161191 ~ 3197982 (-)
G1137174 NA other downstream 347152 3129613 ~ 3130553 (-)
G1136948 NA other downstream 617664 2859031 ~ 2860041 (-)
G1136568 NA other downstream 955344 2521827 ~ 2522361 (-)
LOC118938509 LOC106564044 other downstream 962787 2507219 ~ 2518648 (-)
G1137666 NA other upstream 247359 3731621 ~ 3733300 (-)
G1137672 LOC106595836 other upstream 281020 3765282 ~ 3765816 (-)
G1138151 LOC106606801 other upstream 910483 4394745 ~ 4421260 (-)
G1138232 NA other upstream 1135233 4619495 ~ 4620179 (-)

Expression


Co-expression Network