G1137543


Basic Information

Item Value
gene id G1137543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 3598777 ~ 3600123 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1296211
GTTACTCTGTTCTACAAAACAAAAAGGTATATTACAGTATACCTCCATTATCGGACAGTATACGAGAGAGTCCTGCACTCAGATCAGGCCTTACATTCCTGGGGCCGCATCAATGGTCtcagagctgatctaggatctgttttGTCTTTAAGATTATAACAAATACAATGATATGGACAGggagaacctgatcctagatcagcactcctactaaaATGATACATAACAGCCCCATGGACTAAGAAACACTTAAAATGGAGATTCTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCGGGAAACCAGCCCTGTAAGAACTGGGTCAACTTAGACGACTAGTCTTCTAACATTAATTTACAGAGGAAAGACTGCCAGGTGACTAGGGTTGAAAAATTCTGTGAACTTTCAATGAATTCCCTGGTTT
>TU1296212
GTTACTCTGTTCTACAAAACAAAAAGGTATATTACAGTATACCTCCATTATCGGACAGTATACGAGAGAGTCCTGCACTCAGATCAGGCCTTACATTCCTGGGGCCGCATCAATGGTCtcagagctgatctaggatctgttttGTCTTTAAGATTATAACAAATACAATGATATGGACAGggagaacctgatcctagatcagcactcctactaaaATGATACATAACAGCCCCATGGACTAAGAAACACTTAAAATGGAGATTCTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCATGAGTATGTTTCATCTGGGTCCATGAGTATGTTTCATCTGGGTCCATGAGTATGTCTCATCTGGGTCCATGAGTATGTTTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCATGAGTATGTTTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCATGAGTATGTTTCATCTGGGTCCATGAGTATGTCTCATCTGGGTCCATGAGTATGTTTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCATGAGTGTGTTTCATCTGGGTCCGGGAAACCAGCCCTGTAAGAACTGGGTCAACTTAGACGACTAGTCTTCTAACATTAATTTACAGAGGAAAGACTGCCAGGTGACTAGGGTTGAAAAATTCTGTGAACTTTCAATGAATTCCCTGGTTT

Function

NR:

description
potassium channel subfamily T member 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1296211 False 496 lncRNA 0.42 2 3598777 3600123
TU1296212 True 818 lncRNA 0.44 2 3598777 3600123

Neighbor

gene id symbol gene type direction distance location
LOC110524887 LOC106564116 coding downstream 14397 3572962 ~ 3584380 (-)
LOC110517154 LOC106594599 coding downstream 44716 3533508 ~ 3554061 (-)
LOC110487308 LOC106595461 coding downstream 66636 3521685 ~ 3532141 (-)
LOC110487303 LOC106593981 coding downstream 85617 3508282 ~ 3513160 (-)
LOC110487174 LOC106594426 coding downstream 178656 3414022 ~ 3420121 (-)
LOC118938144 NA coding upstream 98621 3698309 ~ 3705039 (-)
LOC118938145 NA coding upstream 101423 3701546 ~ 3702061 (-)
LOC118938513 LOC106595758 coding upstream 248569 3848692 ~ 3891054 (-)
LOC110493403 LOC106580921 coding upstream 306768 3906891 ~ 3920631 (-)
LOC110512903 LOC106564302 coding upstream 392248 3992371 ~ 4018609 (-)
G1137542 NA non-coding downstream 396 3597361 ~ 3598381 (-)
G1137528 NA non-coding downstream 40828 3556950 ~ 3557949 (-)
G1137527 NA non-coding downstream 46973 3550553 ~ 3551804 (-)
G1137506 NA non-coding downstream 92424 3505633 ~ 3506353 (-)
G1137557 NA non-coding upstream 17175 3617298 ~ 3618910 (-)
G1137577 NA non-coding upstream 58235 3658358 ~ 3661831 (-)
G1137583 NA non-coding upstream 70781 3670904 ~ 3675424 (-)
G1137584 NA non-coding upstream 75564 3675687 ~ 3676451 (-)
G1137648 NA non-coding upstream 80622 3680745 ~ 3681627 (-)
LOC110514041 LOC106585204 other downstream 410593 3161191 ~ 3197982 (-)
G1137174 NA other downstream 468224 3129613 ~ 3130553 (-)
G1136948 NA other downstream 738736 2859031 ~ 2860041 (-)
G1136568 NA other downstream 1076416 2521827 ~ 2522361 (-)
G1137666 NA other upstream 131498 3731621 ~ 3733300 (-)
G1137672 LOC106595836 other upstream 165159 3765282 ~ 3765816 (-)
G1138151 LOC106606801 other upstream 794622 4394745 ~ 4421260 (-)
G1138232 NA other upstream 1019372 4619495 ~ 4620179 (-)
G1138568 NA other upstream 1558042 5158165 ~ 5162954 (-)

Expression


Co-expression Network