Gene
RNA
| Item | Value |
|---|---|
| gene id | G1137669 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 3744834 ~ 3747043 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: sporozoite surface protein 2-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1296428 | True | 863 | lncRNA | 0.38 | 3 | 3744834 | 3747043 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938145 | NA | coding | downstream | 42773 | 3701546 ~ 3702061 (-) |
| LOC118938144 | NA | coding | downstream | 44508 | 3698309 ~ 3705039 (-) |
| LOC110524887 | LOC106564116 | coding | downstream | 160454 | 3572962 ~ 3584380 (-) |
| LOC110517154 | LOC106594599 | coding | downstream | 190773 | 3533508 ~ 3554061 (-) |
| LOC110487308 | LOC106595461 | coding | downstream | 212693 | 3521685 ~ 3532141 (-) |
| LOC118938513 | LOC106595758 | coding | upstream | 101649 | 3848692 ~ 3891054 (-) |
| LOC110493403 | LOC106580921 | coding | upstream | 159848 | 3906891 ~ 3920631 (-) |
| LOC110512903 | LOC106564302 | coding | upstream | 245328 | 3992371 ~ 4018609 (-) |
| LOC110514885 | LOC106593640 | coding | upstream | 272175 | 4019218 ~ 4020526 (-) |
| LOC110487221 | dcaf15 | coding | upstream | 309990 | 4057033 ~ 4098713 (-) |
| G1137670 | NA | non-coding | downstream | 434 | 3744004 ~ 3744400 (-) |
| G1137667 | NA | non-coding | downstream | 8489 | 3734270 ~ 3736345 (-) |
| G1137664 | NA | non-coding | downstream | 15069 | 3729078 ~ 3729765 (-) |
| G1137663 | NA | non-coding | downstream | 16130 | 3728297 ~ 3728704 (-) |
| G1137656 | NA | non-coding | downstream | 31900 | 3712195 ~ 3712934 (-) |
| G1137687 | NA | non-coding | upstream | 42433 | 3789476 ~ 3790647 (-) |
| G1137992 | NA | non-coding | upstream | 209641 | 3956684 ~ 3957020 (-) |
| G1137994 | NA | non-coding | upstream | 217286 | 3964329 ~ 3965415 (-) |
| G1138031 | NA | non-coding | upstream | 228513 | 3975556 ~ 3976008 (-) |
| G1137666 | NA | other | downstream | 11534 | 3731621 ~ 3733300 (-) |
| LOC110514041 | LOC106585204 | other | downstream | 556650 | 3161191 ~ 3197982 (-) |
| G1137174 | NA | other | downstream | 614281 | 3129613 ~ 3130553 (-) |
| G1136948 | NA | other | downstream | 884793 | 2859031 ~ 2860041 (-) |
| G1137672 | LOC106595836 | other | upstream | 18239 | 3765282 ~ 3765816 (-) |
| G1138151 | LOC106606801 | other | upstream | 647702 | 4394745 ~ 4421260 (-) |
| G1138232 | NA | other | upstream | 872452 | 4619495 ~ 4620179 (-) |
| G1138568 | NA | other | upstream | 1411122 | 5158165 ~ 5162954 (-) |
| G1138553 | LOC106592646 | other | upstream | 1454012 | 5201055 ~ 5262513 (-) |
