G1137672 (LOC106595836)


Basic Information

Item Value
gene id G1137672
gene name LOC106595836
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 3765282 ~ 3765816 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1296434
CACGAGGTCCAGTACCACCACTGGCTGCAAGACCCCTCTGTAGTGTTCCAGTAAGACGTGTTCTGGTAAACCGGGCCGGGTCATGACGTGGTAGAGGACAGCGTCCAGCATGCCTTTACACACCGGCCTGTTCAGACTGCCGTCCACGATACGCCACGGACGGCTGACGAACGACACGTCACACACGCCGCCGCTGTCGTCCTCTTCCTCGCGCAGACCGCTAGCTTCACCATCCTCTTCCTCACGCAGACTGCTAGCTTCACCATCCTCTTCCTCACGCAGACCGCTAGCTTCACCGTCCTCTTCCTCACGCAGACCGCTAGCTTCACCATCCTCTTCCTCACGCAGACCGCTAGCTTCACCATCCTCTTCCTTGCGCAGACCGCTAGCTTCACCATCCTCTTCCTCGCGCAGACTGCTAGCTTCACCATCCTCTTCCTCGGCTAGAGATGAAAATGGCTTCTCGCCG

Function

NR:

description
PREDICTED: general transcription factor 3C polypeptide 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1296434 True 469 TUCP 0.59 2 3765282 3765816

Neighbor

gene id symbol gene type direction distance location
LOC118938145 NA coding downstream 63221 3701546 ~ 3702061 (-)
LOC118938144 NA coding downstream 64956 3698309 ~ 3705039 (-)
LOC110524887 LOC106564116 coding downstream 180902 3572962 ~ 3584380 (-)
LOC110517154 LOC106594599 coding downstream 211221 3533508 ~ 3554061 (-)
LOC110487308 LOC106595461 coding downstream 233141 3521685 ~ 3532141 (-)
LOC118938513 LOC106595758 coding upstream 82876 3848692 ~ 3891054 (-)
LOC110493403 LOC106580921 coding upstream 141075 3906891 ~ 3920631 (-)
LOC110512903 LOC106564302 coding upstream 226555 3992371 ~ 4018609 (-)
LOC110514885 LOC106593640 coding upstream 253402 4019218 ~ 4020526 (-)
LOC110487221 dcaf15 coding upstream 291217 4057033 ~ 4098713 (-)
G1137669 NA non-coding downstream 18239 3744834 ~ 3747043 (-)
G1137671 NA non-coding downstream 19483 3744585 ~ 3745799 (-)
G1137670 NA non-coding downstream 20882 3744004 ~ 3744400 (-)
G1137667 NA non-coding downstream 28937 3734270 ~ 3736345 (-)
G1137664 NA non-coding downstream 35517 3729078 ~ 3729765 (-)
G1137687 NA non-coding upstream 23660 3789476 ~ 3790647 (-)
G1137992 NA non-coding upstream 190868 3956684 ~ 3957020 (-)
G1137994 NA non-coding upstream 198513 3964329 ~ 3965415 (-)
G1138031 NA non-coding upstream 209740 3975556 ~ 3976008 (-)
G1137666 NA other downstream 31982 3731621 ~ 3733300 (-)
LOC110514041 LOC106585204 other downstream 577098 3161191 ~ 3197982 (-)
G1137174 NA other downstream 634729 3129613 ~ 3130553 (-)
G1136948 NA other downstream 905241 2859031 ~ 2860041 (-)
G1138151 LOC106606801 other upstream 628929 4394745 ~ 4421260 (-)
G1138232 NA other upstream 853679 4619495 ~ 4620179 (-)
G1138568 NA other upstream 1392349 5158165 ~ 5162954 (-)
G1138553 LOC106592646 other upstream 1435239 5201055 ~ 5262513 (-)
LOC118936520 NA other upstream 1451875 5216411 ~ 5244441 (-)

Expression


Co-expression Network