G1137994


Basic Information

Item Value
gene id G1137994
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 3964329 ~ 3965415 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1296919
accataacaaacagacagaaagtgaagaccataacaaacacagtgaagaccataacaaacaaacagacagtgagtgaagaccataacaaacagacagagagtgaagaccataacaaacagacagtgagtgaagaccataatgaacagacagagagtgaagaccttaacaaacagacagagagtgaagaccataatgaacagacagtgagtgaagaccataacaaacagacagagagtgaagaccataacaaacagacagtgagtgaagaccataatgaacagacagtgaagaccataacaaacagacagtgaagaccataacaaacagacagtgaagaccataacaaacagacagtgagtgaagaccataatgaacagacagagagtgaagaccataacaaacagacagtgagtgaagaccataacaaacagacagagagtaaagacc
>TU1296920
accataacaaacagacagaaagtgaagaccataacaaacacagtgaagaccataacaaacaaacagacagtgagtgaagaccataacaaacagacagagagtgaagaccataacaaacagacagtgagtgaagaccataatgaacagacagagagtgaagaccataacaaacagacagtgagtgaagaccataacaaacagacagacagtgaagaccatgacaaacagacagtgagtgaagaccataacaaacagacagagagtgaagaccataacaaacagacagagagtaaagaccttaacaaacagacagagagtgaagaccataatgaacagacagtgagtgaagaccataacaaacagacagagagtgaagaccataacaaacagacagagagtgaagaccataacaaacagacagagagtaaagaccttaacaaacagacagagagtgaagaccataatgaacagacagtgagtgaagaccataacaaacagacagagagtgaagaAGACCATAATgaacagacagtgagtgaagaccataacaaacagacagagagtgaagaccataacaaacagacagtgagtgaagaccataacaaacagacagtgaagaccataacaaacagacagtgaagaccataaaacagacagagtgaagaccataacaaacagacagtgagtgaagaccataatgaacagacagagagtgaagaccataacaaacagacagtgagtgaagaccataacaaacagacagagagtaaagacc

Function

NR:

description
PREDICTED: uncharacterized protein LOC109138918

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1296919 False 448 lncRNA 0.40 2 3964329 3965415
TU1296920 True 775 lncRNA 0.40 2 3964329 3965415

Neighbor

gene id symbol gene type direction distance location
LOC110493403 LOC106580921 coding downstream 43698 3906891 ~ 3920631 (-)
LOC118938513 LOC106595758 coding downstream 73275 3848692 ~ 3891054 (-)
LOC118938145 NA coding downstream 262268 3701546 ~ 3702061 (-)
LOC118938144 NA coding downstream 264003 3698309 ~ 3705039 (-)
LOC110524887 LOC106564116 coding downstream 379949 3572962 ~ 3584380 (-)
LOC110512903 LOC106564302 coding upstream 26956 3992371 ~ 4018609 (-)
LOC110514885 LOC106593640 coding upstream 53803 4019218 ~ 4020526 (-)
LOC110487221 dcaf15 coding upstream 91618 4057033 ~ 4098713 (-)
LOC110485446 LOC106592110 coding upstream 133506 4098921 ~ 4114272 (-)
LOC110493393 LOC105012066 coding upstream 152349 4117764 ~ 4152718 (-)
G1137992 NA non-coding downstream 7309 3956684 ~ 3957020 (-)
G1137687 NA non-coding downstream 173682 3789476 ~ 3790647 (-)
G1137669 NA non-coding downstream 217286 3744834 ~ 3747043 (-)
G1137671 NA non-coding downstream 218530 3744585 ~ 3745799 (-)
G1138031 NA non-coding upstream 10141 3975556 ~ 3976008 (-)
G1138032 NA non-coding upstream 12442 3977857 ~ 3978640 (-)
G1138021 NA non-coding upstream 48361 4013776 ~ 4020694 (-)
G1138019 NA non-coding upstream 87827 4053242 ~ 4053893 (-)
G1138005 NA non-coding upstream 89147 4054562 ~ 4055397 (-)
G1137672 LOC106595836 other downstream 198513 3765282 ~ 3765816 (-)
G1137666 NA other downstream 231029 3731621 ~ 3733300 (-)
LOC110487308 LOC106595461 other downstream 432205 3521685 ~ 3532141 (-)
LOC110514041 LOC106585204 other downstream 776145 3161191 ~ 3197982 (-)
G1137174 NA other downstream 833776 3129613 ~ 3130553 (-)
G1138151 LOC106606801 other upstream 429330 4394745 ~ 4421260 (-)
G1138232 NA other upstream 654080 4619495 ~ 4620179 (-)
G1138568 NA other upstream 1192750 5158165 ~ 5162954 (-)
G1138553 LOC106592646 other upstream 1235640 5201055 ~ 5262513 (-)
LOC118936520 NA other upstream 1252276 5216411 ~ 5244441 (-)

Expression


Co-expression Network