G1138041


Basic Information

Item Value
gene id G1138041
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 4059381 ~ 4060081 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1296974
tcctctctagtcacctggtgaggtgttctggggtctcgagggctgttttcctctctagtcacctggtgaggtgttctggggtctggaggtctgttttcctggctagtcacctggtgaggtgttctggggtctggaggtctgttttcctctgttttcctgattagtcacctggtgaggtgttctggggtctggagggctgttctccctctgttttcctggatggtcacctggtgaggtgttctggggtctggaggtctgttttcctggctggGGTCTGGATggctgttttcctggatggtcacctggtgaggtattctggggtctggaggtctgttttcctggatggtcacctggtgaggtgttctggggtctggaggtctgttttcctggatggtcacatggtgaggtgttctggggtctggaggtctgttttcctggctagtcacctggtgaggtgttctggggtctggagggctgttctctctctgttttcctggatggtcacctggtgaggtgttctggggtctcgagggctgttttcctctctagtcacctggtgaggtgttctcgggtctggaggtctgttttcctctctagtcacctggtgaggtgttctggggtctggagggatgttttcctggatggtcacctggtgaggtgttctggggtctggaggtctgttttcctgactagtcacctgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1296974 True 701 lncRNA 0.55 1 4059381 4060081

Neighbor

gene id symbol gene type direction distance location
LOC110514885 LOC106593640 coding downstream 38855 4019218 ~ 4020526 (-)
LOC110512903 LOC106564302 coding downstream 40772 3992371 ~ 4018609 (-)
LOC110493403 LOC106580921 coding downstream 138750 3906891 ~ 3920631 (-)
LOC118938513 LOC106595758 coding downstream 168327 3848692 ~ 3891054 (-)
LOC118938145 NA coding downstream 357320 3701546 ~ 3702061 (-)
LOC110485446 LOC106592110 coding upstream 38840 4098921 ~ 4114272 (-)
LOC110493393 LOC105012066 coding upstream 57683 4117764 ~ 4152718 (-)
LOC118938148 NA coding upstream 93154 4152927 ~ 4154217 (-)
LOC118938149 LOC106564249 coding upstream 102657 4162738 ~ 4165860 (-)
LOC118938150 LOC106595636 coding upstream 110747 4170828 ~ 4185204 (-)
G1138005 NA non-coding downstream 3984 4054562 ~ 4055397 (-)
G1138019 NA non-coding downstream 5488 4053242 ~ 4053893 (-)
G1138021 NA non-coding downstream 38687 4013776 ~ 4020694 (-)
G1138032 NA non-coding downstream 80741 3977857 ~ 3978640 (-)
G1138031 NA non-coding downstream 83373 3975556 ~ 3976008 (-)
G1138059 NA non-coding upstream 444 4060525 ~ 4064639 (-)
G1138060 NA non-coding upstream 8784 4068865 ~ 4069299 (-)
G1138022 NA non-coding upstream 14104 4074185 ~ 4074705 (-)
G1138062 NA non-coding upstream 20733 4080814 ~ 4081034 (-)
G1138064 NA non-coding upstream 22499 4082580 ~ 4082945 (-)
G1137672 LOC106595836 other downstream 293565 3765282 ~ 3765816 (-)
G1137666 NA other downstream 326081 3731621 ~ 3733300 (-)
LOC110487308 LOC106595461 other downstream 527257 3521685 ~ 3532141 (-)
LOC110514041 LOC106585204 other downstream 871197 3161191 ~ 3197982 (-)
G1137174 NA other downstream 928828 3129613 ~ 3130553 (-)
G1138151 LOC106606801 other upstream 334664 4394745 ~ 4421260 (-)
G1138232 NA other upstream 559414 4619495 ~ 4620179 (-)
G1138568 NA other upstream 1098084 5158165 ~ 5162954 (-)
G1138553 LOC106592646 other upstream 1140974 5201055 ~ 5262513 (-)
LOC118936520 NA other upstream 1157610 5216411 ~ 5244441 (-)

Expression


Co-expression Network