Gene
RNA
| Item | Value |
|---|---|
| gene id | G1138186 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 4498658 ~ 4499488 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1297144 | False | 371 | lncRNA | 0.33 | 4 | 4498658 | 4499488 |
| TU1297145 | True | 463 | lncRNA | 0.32 | 4 | 4498658 | 4499488 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519427 | LOC106592376 | coding | downstream | 160998 | 4325772 ~ 4337660 (-) |
| LOC118938151 | LOC106592341 | coding | downstream | 177379 | 4313122 ~ 4321279 (-) |
| LOC110485404 | LOC106591939 | coding | downstream | 186221 | 4293455 ~ 4312437 (-) |
| LOC110493382 | LOC106564272 | coding | downstream | 215461 | 4271881 ~ 4283197 (-) |
| rtnanos3 | rtnanos3 | coding | downstream | 227231 | 4269699 ~ 4271427 (-) |
| LOC118936518 | LOC106606801 | coding | upstream | 106866 | 4606354 ~ 4612954 (-) |
| LOC118938535 | LOC106591275 | coding | upstream | 120734 | 4620222 ~ 4622987 (-) |
| LOC118938536 | NA | coding | upstream | 237725 | 4737213 ~ 4741711 (-) |
| LOC118938155 | LOC106564258 | coding | upstream | 255590 | 4755078 ~ 4767260 (-) |
| LOC118936519 | LOC106564260 | coding | upstream | 271191 | 4770679 ~ 4796554 (-) |
| G1138176 | NA | non-coding | downstream | 56546 | 4441797 ~ 4442112 (-) |
| G1138150 | NA | non-coding | downstream | 63550 | 4385448 ~ 4435108 (-) |
| G1138152 | NA | non-coding | downstream | 63891 | 4427389 ~ 4434767 (-) |
| G1138151 | LOC106606801 | non-coding | downstream | 77398 | 4394745 ~ 4421260 (-) |
| G1138166 | NA | non-coding | downstream | 78702 | 4419162 ~ 4419956 (-) |
| G1138221 | NA | non-coding | upstream | 88013 | 4587501 ~ 4588191 (-) |
| G1138225 | NA | non-coding | upstream | 102341 | 4601829 ~ 4602316 (-) |
| G1138228 | NA | non-coding | upstream | 108615 | 4608103 ~ 4608883 (-) |
| G1138232 | NA | non-coding | upstream | 120007 | 4619495 ~ 4620179 (-) |
| G1138234 | NA | non-coding | upstream | 126315 | 4625803 ~ 4626333 (-) |
| G1137672 | LOC106595836 | other | downstream | 732842 | 3765282 ~ 3765816 (-) |
| G1137666 | NA | other | downstream | 765358 | 3731621 ~ 3733300 (-) |
| LOC110487308 | LOC106595461 | other | downstream | 966534 | 3521685 ~ 3532141 (-) |
| LOC110514041 | LOC106585204 | other | downstream | 1310474 | 3161191 ~ 3197982 (-) |
| G1138568 | NA | other | upstream | 658677 | 5158165 ~ 5162954 (-) |
| G1138553 | LOC106592646 | other | upstream | 701567 | 5201055 ~ 5262513 (-) |
| LOC118936520 | NA | other | upstream | 718203 | 5216411 ~ 5244441 (-) |
| LOC118938515 | LOC106592948 | other | upstream | 1171972 | 5671437 ~ 5678473 (-) |
