G1138228


Basic Information

Item Value
gene id G1138228
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 4608103 ~ 4608883 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1297201
atatgagggtaggttagtgttgtgatatgagggtaggttagtgttatgatatgagggtaggttagtgttatgatatgagggtaggttagtgttatgatatgagggtaggttagtgttgtgatatgagggtaggttagtgttatgatatgagggtaggttagtgttatgatatgagggtaggttagtgttatgatatgagggtaggttagtgttatgatatgagggtaggttagtgttatgatatgagggtaggttagtgttatgatatgagggtaggttagtgttagacatgtctgtatgtagtgttatgatatgagggtaggttagtgttatgatatgagggtaggttagtgttagacatgtctgtatgtagtgttatgatatgagggtaggttagtgttagacatgtctgtatgtagtgttatgatatgagggtaggttagtgttatgatatgagggtaggttagtgttagacatgtctgtatgtagtgttatgatacGAGGGTAGATTAGTGTTAtaatatgagggtaggttagtggtatgatatg

Function

NR:

description
extensin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1297201 True 549 lncRNA 0.38 3 4608103 4608883

Neighbor

gene id symbol gene type direction distance location
LOC110519427 LOC106592376 coding downstream 270443 4325772 ~ 4337660 (-)
LOC118938151 LOC106592341 coding downstream 286824 4313122 ~ 4321279 (-)
LOC110485404 LOC106591939 coding downstream 295666 4293455 ~ 4312437 (-)
LOC110493382 LOC106564272 coding downstream 324906 4271881 ~ 4283197 (-)
rtnanos3 rtnanos3 coding downstream 336676 4269699 ~ 4271427 (-)
LOC118938535 LOC106591275 coding upstream 11339 4620222 ~ 4622987 (-)
LOC118938536 NA coding upstream 128330 4737213 ~ 4741711 (-)
LOC118938155 LOC106564258 coding upstream 146195 4755078 ~ 4767260 (-)
LOC118936519 LOC106564260 coding upstream 161796 4770679 ~ 4796554 (-)
LOC110493400 as1la coding upstream 188876 4797759 ~ 4807623 (-)
G1138225 NA non-coding downstream 5787 4601829 ~ 4602316 (-)
G1138221 NA non-coding downstream 19912 4587501 ~ 4588191 (-)
G1138186 NA non-coding downstream 108615 4498658 ~ 4499488 (-)
G1138176 NA non-coding downstream 165991 4441797 ~ 4442112 (-)
G1138152 NA non-coding downstream 173336 4427389 ~ 4434767 (-)
G1138232 NA non-coding upstream 10612 4619495 ~ 4620179 (-)
G1138234 NA non-coding upstream 16920 4625803 ~ 4626333 (-)
G1138236 NA non-coding upstream 18829 4627712 ~ 4630863 (-)
G1138309 NA non-coding upstream 128612 4737495 ~ 4738362 (-)
G1138315 LOC100194703 non-coding upstream 138834 4747717 ~ 4750557 (-)
G1138151 LOC106606801 other downstream 186843 4394745 ~ 4421260 (-)
G1137672 LOC106595836 other downstream 842287 3765282 ~ 3765816 (-)
G1137666 NA other downstream 874803 3731621 ~ 3733300 (-)
LOC110487308 LOC106595461 other downstream 1075979 3521685 ~ 3532141 (-)
LOC110514041 LOC106585204 other downstream 1419919 3161191 ~ 3197982 (-)
G1138568 NA other upstream 549282 5158165 ~ 5162954 (-)
G1138553 LOC106592646 other upstream 592172 5201055 ~ 5262513 (-)
LOC118936520 NA other upstream 608808 5216411 ~ 5244441 (-)
LOC118938515 LOC106592948 other upstream 1062577 5671437 ~ 5678473 (-)

Expression


Co-expression Network