G1138309


Basic Information

Item Value
gene id G1138309
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 4737495 ~ 4738362 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1297327
gtactataacagtgttataactagcttaactaaatcaccagggtaacagagtactataacagtgttataactagcttaactaaatcaccagggtaacagagtactacaacTGtgttataactagcttaactaaatcaccagggtaacagagtactataacagtggtataactagcttaactaaatcaccagggtaacaTTCATTAGGTATCAAACGGACTGGCACTACCTGAACTTGACCAATAAGAAACACTCACATTTGTTTttcatttcaaaatgttttgctaaCTTAAGCAACTAATGACTATGACCCACGTTTCCATTCTGCACTTGGTCTTATTATATCCATGAAGCAATAAGGGCTGAGATGAGGCCAGGACAGGTCTGTCCTCTACTCTTTGTAAACAGAGCTGTAGACTGGGCTAAATTCAGATCATCGTCACATGGAGAAACAGGAGCTATGTggggcaagtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1297327 True 477 lncRNA 0.39 2 4737495 4738362

Neighbor

gene id symbol gene type direction distance location
LOC118938535 LOC106591275 coding downstream 114508 4620222 ~ 4622987 (-)
LOC118936518 LOC106606801 coding downstream 124541 4606354 ~ 4612954 (-)
LOC110519427 LOC106592376 coding downstream 399835 4325772 ~ 4337660 (-)
LOC118938151 LOC106592341 coding downstream 416216 4313122 ~ 4321279 (-)
LOC110485404 LOC106591939 coding downstream 425058 4293455 ~ 4312437 (-)
LOC118938155 LOC106564258 coding upstream 16716 4755078 ~ 4767260 (-)
LOC118936519 LOC106564260 coding upstream 32317 4770679 ~ 4796554 (-)
LOC110493400 as1la coding upstream 59397 4797759 ~ 4807623 (-)
LOC110510582 LOC106592158 coding upstream 76383 4814745 ~ 4838008 (-)
gcgrb LOC106591591 coding upstream 204767 4943129 ~ 5000791 (-)
G1138236 NA non-coding downstream 106632 4627712 ~ 4630863 (-)
G1138234 NA non-coding downstream 111162 4625803 ~ 4626333 (-)
G1138232 NA non-coding downstream 117316 4619495 ~ 4620179 (-)
G1138228 NA non-coding downstream 128612 4608103 ~ 4608883 (-)
G1138225 NA non-coding downstream 135179 4601829 ~ 4602316 (-)
G1138315 LOC100194703 non-coding upstream 9355 4747717 ~ 4750557 (-)
G1138320 NA non-coding upstream 17350 4755712 ~ 4758159 (-)
G1138316 NA non-coding upstream 29560 4767922 ~ 4770635 (-)
G1138331 NA non-coding upstream 67145 4805507 ~ 4805954 (-)
G1138340 NA non-coding upstream 86167 4824529 ~ 4825246 (-)
G1138151 LOC106606801 other downstream 316235 4394745 ~ 4421260 (-)
G1137672 LOC106595836 other downstream 971679 3765282 ~ 3765816 (-)
G1137666 NA other downstream 1004195 3731621 ~ 3733300 (-)
LOC110487308 LOC106595461 other downstream 1205371 3521685 ~ 3532141 (-)
G1138568 NA other upstream 419803 5158165 ~ 5162954 (-)
G1138553 LOC106592646 other upstream 462693 5201055 ~ 5262513 (-)
LOC118936520 NA other upstream 479329 5216411 ~ 5244441 (-)
LOC118938515 LOC106592948 other upstream 933098 5671437 ~ 5678473 (-)
LOC110512654 LOC106592307 other upstream 1306495 6044857 ~ 6058622 (-)

Expression


Co-expression Network