Item | Value |
---|---|
gene id | G1138316 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048577.1 |
NCBI id | CM023231.2 |
chromosome length | 73332040 |
location | 4767922 ~ 4770635 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1297339 | False | 1299 | lncRNA | 0.43 | 2 | 4767922 | 4769281 |
TU1297340 | False | 1298 | lncRNA | 0.43 | 2 | 4767922 | 4769281 |
TU1297341 | False | 2464 | lncRNA | 0.44 | 3 | 4767922 | 4770635 |
TU1297342 | False | 1050 | lncRNA | 0.43 | 2 | 4767922 | 4769281 |
TU1297347 | False | 2559 | lncRNA | 0.45 | 3 | 4767922 | 4770635 |
TU1297355 | False | 2632 | lncRNA | 0.44 | 3 | 4767922 | 4770635 |
TU1297357 | False | 2558 | lncRNA | 0.44 | 3 | 4767922 | 4770635 |
TU1297361 | True | 2387 | lncRNA | 0.44 | 2 | 4767922 | 4770635 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118938155 | LOC106564258 | coding | downstream | 662 | 4755078 ~ 4767260 (-) |
LOC118938536 | NA | coding | downstream | 26211 | 4737213 ~ 4741711 (-) |
LOC118938535 | LOC106591275 | coding | downstream | 144935 | 4620222 ~ 4622987 (-) |
LOC118936518 | LOC106606801 | coding | downstream | 154968 | 4606354 ~ 4612954 (-) |
LOC110519427 | LOC106592376 | coding | downstream | 430262 | 4325772 ~ 4337660 (-) |
LOC118936519 | LOC106564260 | coding | upstream | 44 | 4770679 ~ 4796554 (-) |
LOC110493400 | as1la | coding | upstream | 27124 | 4797759 ~ 4807623 (-) |
LOC110510582 | LOC106592158 | coding | upstream | 44110 | 4814745 ~ 4838008 (-) |
gcgrb | LOC106591591 | coding | upstream | 172494 | 4943129 ~ 5000791 (-) |
LOC110513279 | LOC105029740 | coding | upstream | 257443 | 5028078 ~ 5055105 (-) |
G1138320 | NA | non-coding | downstream | 9763 | 4755712 ~ 4758159 (-) |
G1138315 | LOC100194703 | non-coding | downstream | 17365 | 4747717 ~ 4750557 (-) |
G1138309 | NA | non-coding | downstream | 29560 | 4737495 ~ 4738362 (-) |
G1138236 | NA | non-coding | downstream | 137059 | 4627712 ~ 4630863 (-) |
G1138234 | NA | non-coding | downstream | 141589 | 4625803 ~ 4626333 (-) |
G1138331 | NA | non-coding | upstream | 34872 | 4805507 ~ 4805954 (-) |
G1138340 | NA | non-coding | upstream | 53894 | 4824529 ~ 4825246 (-) |
G1138362 | NA | non-coding | upstream | 93672 | 4864307 ~ 4865332 (-) |
G1138364 | NA | non-coding | upstream | 96357 | 4866992 ~ 4868323 (-) |
G1138542 | NA | non-coding | upstream | 169050 | 4939685 ~ 4940698 (-) |
G1138232 | NA | other | downstream | 148058 | 4619495 ~ 4620179 (-) |
G1138151 | LOC106606801 | other | downstream | 346662 | 4394745 ~ 4421260 (-) |
G1137672 | LOC106595836 | other | downstream | 1002106 | 3765282 ~ 3765816 (-) |
G1137666 | NA | other | downstream | 1034622 | 3731621 ~ 3733300 (-) |
LOC110487308 | LOC106595461 | other | downstream | 1235798 | 3521685 ~ 3532141 (-) |
G1138568 | NA | other | upstream | 387530 | 5158165 ~ 5162954 (-) |
G1138553 | LOC106592646 | other | upstream | 430420 | 5201055 ~ 5262513 (-) |
LOC118936520 | NA | other | upstream | 447056 | 5216411 ~ 5244441 (-) |
LOC118938515 | LOC106592948 | other | upstream | 900825 | 5671437 ~ 5678473 (-) |
LOC110512654 | LOC106592307 | other | upstream | 1274222 | 6044857 ~ 6058622 (-) |