Gene
RNA
| Item | Value |
|---|---|
| gene id | G1138609 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 5073451 ~ 5073730 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: antigen LPMC-61-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1297727 | True | 280 | lncRNA | 0.47 | 1 | 5073451 | 5073730 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513280 | LOC106564244 | coding | downstream | 11932 | 5058451 ~ 5061519 (-) |
| LOC110513279 | LOC105029740 | coding | downstream | 18346 | 5028078 ~ 5055105 (-) |
| gcgrb | LOC106591591 | coding | downstream | 72660 | 4943129 ~ 5000791 (-) |
| LOC110510582 | LOC106592158 | coding | downstream | 235443 | 4814745 ~ 4838008 (-) |
| LOC110493400 | as1la | coding | downstream | 265828 | 4797759 ~ 4807623 (-) |
| LOC110485437 | NA | coding | upstream | 18885 | 5092615 ~ 5094443 (-) |
| LOC118938158 | LOC106592452 | coding | upstream | 39101 | 5112831 ~ 5115196 (-) |
| LOC110485443 | LOC106592430 | coding | upstream | 54494 | 5128224 ~ 5141579 (-) |
| LOC110485440 | LOC106597237 | coding | upstream | 64854 | 5138584 ~ 5141623 (-) |
| LOC118938159 | LOC106592320 | coding | upstream | 75510 | 5149240 ~ 5155100 (-) |
| G1138601 | NA | non-coding | downstream | 1521 | 5065871 ~ 5071930 (-) |
| G1138607 | NA | non-coding | downstream | 8446 | 5064561 ~ 5065005 (-) |
| G1138598 | NA | non-coding | downstream | 28526 | 5041521 ~ 5044925 (-) |
| G1138599 | NA | non-coding | downstream | 30952 | 5041931 ~ 5042499 (-) |
| G1138554 | NA | non-coding | downstream | 45685 | 5026006 ~ 5027766 (-) |
| G1138610 | NA | non-coding | upstream | 801 | 5074531 ~ 5074974 (-) |
| G1138611 | NA | non-coding | upstream | 2838 | 5076568 ~ 5077162 (-) |
| G1138612 | NA | non-coding | upstream | 8317 | 5082047 ~ 5084534 (-) |
| G1138564 | NA | non-coding | upstream | 11195 | 5084925 ~ 5174499 (-) |
| G1138232 | NA | other | downstream | 453587 | 4619495 ~ 4620179 (-) |
| G1138151 | LOC106606801 | other | downstream | 652191 | 4394745 ~ 4421260 (-) |
| G1137672 | LOC106595836 | other | downstream | 1307635 | 3765282 ~ 3765816 (-) |
| G1137666 | NA | other | downstream | 1340151 | 3731621 ~ 3733300 (-) |
| LOC110487308 | LOC106595461 | other | downstream | 1541327 | 3521685 ~ 3532141 (-) |
| G1138568 | NA | other | upstream | 84435 | 5158165 ~ 5162954 (-) |
| G1138553 | LOC106592646 | other | upstream | 127325 | 5201055 ~ 5262513 (-) |
| LOC118936520 | NA | other | upstream | 143961 | 5216411 ~ 5244441 (-) |
| LOC118938515 | LOC106592948 | other | upstream | 597730 | 5671437 ~ 5678473 (-) |
| LOC110512654 | LOC106592307 | other | upstream | 971127 | 6044857 ~ 6058622 (-) |
