Gene
RNA
| Item | Value |
|---|---|
| gene id | G1138571 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 5258097 ~ 5258533 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1297680 | True | 373 | lncRNA | 0.46 | 2 | 5258097 | 5258533 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936520 | NA | coding | downstream | 13656 | 5216411 ~ 5244441 (-) |
| LOC118938162 | LOC106592646 | coding | downstream | 46588 | 5200479 ~ 5211509 (-) |
| LOC118938161 | LOC106592320 | coding | downstream | 80180 | 5168329 ~ 5177917 (-) |
| LOC118938159 | LOC106592320 | coding | downstream | 102997 | 5149240 ~ 5155100 (-) |
| LOC110485440 | LOC106597237 | coding | downstream | 116474 | 5138584 ~ 5141623 (-) |
| LOC110485445 | LOC106564237 | coding | upstream | 20413 | 5278946 ~ 5280863 (-) |
| LOC110517601 | tmed1 | coding | upstream | 326521 | 5585054 ~ 5595560 (-) |
| LOC110516670 | LOC106592431 | coding | upstream | 368078 | 5626611 ~ 5629846 (-) |
| LOC118938515 | LOC106592948 | coding | upstream | 412904 | 5671437 ~ 5678473 (-) |
| LOC110487505 | LOC106593267 | coding | upstream | 420631 | 5679164 ~ 5756340 (-) |
| G1138632 | NA | non-coding | downstream | 6961 | 5250262 ~ 5251136 (-) |
| G1138628 | NA | non-coding | downstream | 30007 | 5222756 ~ 5228090 (-) |
| G1138572 | NA | non-coding | downstream | 67726 | 5172449 ~ 5190371 (-) |
| G1138620 | NA | non-coding | downstream | 111461 | 5146263 ~ 5146636 (-) |
| G1138619 | NA | non-coding | downstream | 111947 | 5144597 ~ 5146150 (-) |
| G1138634 | NA | non-coding | upstream | 14851 | 5273384 ~ 5273692 (-) |
| G1138637 | NA | non-coding | upstream | 18516 | 5277049 ~ 5277273 (-) |
| G1138640 | NA | non-coding | upstream | 28840 | 5287373 ~ 5287611 (-) |
| G1138645 | NA | non-coding | upstream | 41318 | 5299851 ~ 5301300 (-) |
| G1138655 | NA | non-coding | upstream | 63768 | 5322301 ~ 5329724 (-) |
| G1138568 | NA | other | downstream | 95143 | 5158165 ~ 5162954 (-) |
| G1138232 | NA | other | downstream | 638233 | 4619495 ~ 4620179 (-) |
| G1138151 | LOC106606801 | other | downstream | 836837 | 4394745 ~ 4421260 (-) |
| G1137672 | LOC106595836 | other | downstream | 1492281 | 3765282 ~ 3765816 (-) |
| LOC110512654 | LOC106592307 | other | upstream | 786324 | 6044857 ~ 6058622 (-) |
| G1139916 | NA | other | upstream | 833826 | 6092359 ~ 6093516 (-) |
| LOC110485426 | LOC106594040 | other | upstream | 1347786 | 6600141 ~ 6649233 (-) |
| LOC118938170 | LOC106564207 | other | upstream | 1439849 | 6698319 ~ 6717102 (-) |
