G1138645


Basic Information

Item Value
gene id G1138645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 5299851 ~ 5301300 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1297765
GAGGTGGAGTGGTTAGAGTATGCTATTTAGTGGTGTGTAGGTGTTGGAAGGTCTTTGAAGTGGAAATAAATTAACACTATATTTatggagtgaggtagacagtattgtggagtgaggtatagagtattgtggagtgaggtatagagtattgtggagtgaggtatagagtattgtggagtgaggtagacagtattgtggagtgaggtagacagtattgtggagtgaggtataaagtattgtggagtgaggtagacagtattgtggagtgaggtatagagtattgtggagtgaggtatagagtattgtggagtgaggtagacagtattgtggagtgaggtagacagtattgtggagtgaggtagacagtattgtggagtgaggtatagagtattgtggagtgaggtataAAGTActgtgg
>TU1297766
GAGGTGGAGTGGTTAGAGTATGCTATTTAGTGGTGTGTAGGTGTTGGAAGGTCTTTGAAGTGGAAATAAATTAACACTATATTTatggagtgaggtagacagtattgtggagtgaggtatagagtattgtggagtgaggtatagagtattgtggagtgaggtagacagtattgtggagtgaggtagacagtattgtggagtgaggtagacagtattgtggagtgaggtatagagtattgtggagtgaggtagacagtattgtggagtgaggtataaagtattgtggagtgaggtagacagtattgtggagtgaggtataAAGTActgtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1297765 False 418 lncRNA 0.42 2 5299851 5301300
TU1297766 True 330 lncRNA 0.42 3 5299851 5301300
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110485445 LOC106564237 coding downstream 18988 5278946 ~ 5280863 (-)
LOC110516762 LOC106592646 coding downstream 33364 5245446 ~ 5266487 (-)
LOC118936520 NA coding downstream 55410 5216411 ~ 5244441 (-)
LOC118938162 LOC106592646 coding downstream 88342 5200479 ~ 5211509 (-)
LOC118938161 LOC106592320 coding downstream 121934 5168329 ~ 5177917 (-)
LOC110517601 tmed1 coding upstream 283754 5585054 ~ 5595560 (-)
LOC110516670 LOC106592431 coding upstream 325311 5626611 ~ 5629846 (-)
LOC118938515 LOC106592948 coding upstream 370137 5671437 ~ 5678473 (-)
LOC110487505 LOC106593267 coding upstream 377864 5679164 ~ 5756340 (-)
LOC110485432 LOC106593320 coding upstream 455433 5756733 ~ 5783389 (-)
G1138640 NA non-coding downstream 12240 5287373 ~ 5287611 (-)
G1138637 NA non-coding downstream 22578 5277049 ~ 5277273 (-)
G1138634 NA non-coding downstream 26159 5273384 ~ 5273692 (-)
G1138571 NA non-coding downstream 41318 5258097 ~ 5258533 (-)
G1138632 NA non-coding downstream 48715 5250262 ~ 5251136 (-)
G1138655 NA non-coding upstream 21001 5322301 ~ 5329724 (-)
G1138663 NA non-coding upstream 40678 5341978 ~ 5342438 (-)
G1138664 NA non-coding upstream 41348 5342648 ~ 5343078 (-)
G1138691 NA non-coding upstream 56192 5357492 ~ 5359500 (-)
G1138700 NA non-coding upstream 64375 5365675 ~ 5365938 (-)
G1138553 LOC106592646 other downstream 37338 5201055 ~ 5262513 (-)
G1138568 NA other downstream 136897 5158165 ~ 5162954 (-)
G1138232 NA other downstream 679987 4619495 ~ 4620179 (-)
G1138151 LOC106606801 other downstream 878591 4394745 ~ 4421260 (-)
LOC110512654 LOC106592307 other upstream 743557 6044857 ~ 6058622 (-)
G1139916 NA other upstream 791059 6092359 ~ 6093516 (-)
LOC110485426 LOC106594040 other upstream 1305019 6600141 ~ 6649233 (-)
LOC118938170 LOC106564207 other upstream 1397082 6698319 ~ 6717102 (-)

Expression

G1138645 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
End of interactive chart.

G1138645 Expression in each Bioproject

Bar chart with 10 bars.
G1138645 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network