G1138691


Basic Information

Item Value
gene id G1138691
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 5357492 ~ 5359500 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1297839
AACACCATCATTTATTAGTATATAGTTgttcatatactgtatatcagtcTAATAAATACCTAcagtagtctgtgtgtgtgtgtgtgtgtgtgtgtatctatgcaCACATTCAcgtccatctgtctgtcagtGCAGAGAAGACATCACAGCTCATCACTCCTCCTGAGAGAGATGAGACTataccttctctctctttcattctctctctctgtccatccagaAGTCCACTTCCACTGAGTGTAATCTTGTTGGCTGGGAAAGTGGTCTCCCTGAGGTCCTCCAAGACGCCACGGGAGCTGGGTCGCAAAGCATTGTGGGTCTGTCGACAAGACAGGCACGAGGGTCTGAGAATACAATCAACAATGTCCGTTTGACCAAGTTTAGACTAGTTTAATCCAGTTAGGTCTGGTTTAATCCGGTTAGGTCGAGTTAGGTCTGGTTTAATCCAGTTAGGTCTGATTTTATCTAGTTAAGTCCAGTCAGGTCCAGTTGGTAAAGTGTGTTAGGTCCTGTGCAGAGAGGGTTAGACTGGGAGATGAGGGGCAGAGAGGGTTAGACTGGGGGATGAGGGGCAGAGAGGGTTAGACTGGGGGATGAGGGGCAGAGAGGGTTAGACTGGGGGATGAGGGGCAGAGAGGGTTAGACTGGGGGATGAGGGGCAGAGAGGGTTAGACTGGGGGATGAGGGGCAGAGAGGGTTAGACTGGGGGATGAGGGGCAGAGAGGGTTAGACTGGGGGGTGAGGGGCAGAGAGGGTTAGACTGGGGGGTGAGGGGCAGAGAGGGTTAGACTGGGAGATGAGGGGCAGAGAGGGTTAGACTGGGGGATGAGGGGCAGAGAGGGTTAGACTGGGAGATGAGGGGCAGAGAGGGTTAGACAGGGAGATGAGGGGCAGAGAGGGTTAGACTGGGAGATGAGGGGCAGAGAGGGTTAGACTGGGAGATGAGTTGCAGAGAGGGTTAGACTGGGAGATGAGTTGCAGAGAGGGTTAGACTGGGGGATGAGTTGCAGAGAGGGTTAGACTGGGGGATGAGGGGCAGAGAGGGTTAGACAGGGAGATGAGGGGCAGAGAGGGTTAGACTGGGAGATGAGGGGCAGAGAGGGTTAGACTGGGAGATGAGTTGCAGAGAGGGTTAGACTGGGGGATGAGTTGCAGAGAGGGTTAGACTGGgggaggaggggcagagagggttaGACTGGGAGATGAGGGGCAAAGAGGGTTAGACTGGGAGATGAGGGGCAGAGAGGGTTAGACAGGGagatacagtgggggaaaaaatgatttagtcagccaccaattgtgcaagttctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1297839 True 1311 lncRNA 0.53 2 5357492 5359500

Neighbor

gene id symbol gene type direction distance location
LOC110485445 LOC106564237 coding downstream 76629 5278946 ~ 5280863 (-)
LOC110516762 LOC106592646 coding downstream 91005 5245446 ~ 5266487 (-)
LOC118936520 NA coding downstream 113051 5216411 ~ 5244441 (-)
LOC118938162 LOC106592646 coding downstream 145983 5200479 ~ 5211509 (-)
LOC118938161 LOC106592320 coding downstream 179575 5168329 ~ 5177917 (-)
LOC110517601 tmed1 coding upstream 225554 5585054 ~ 5595560 (-)
LOC110516670 LOC106592431 coding upstream 267111 5626611 ~ 5629846 (-)
LOC118938515 LOC106592948 coding upstream 311937 5671437 ~ 5678473 (-)
LOC110487505 LOC106593267 coding upstream 319664 5679164 ~ 5756340 (-)
LOC110485432 LOC106593320 coding upstream 397233 5756733 ~ 5783389 (-)
G1138664 NA non-coding downstream 14414 5342648 ~ 5343078 (-)
G1138663 NA non-coding downstream 15054 5341978 ~ 5342438 (-)
G1138655 NA non-coding downstream 27768 5322301 ~ 5329724 (-)
G1138645 NA non-coding downstream 56192 5299851 ~ 5301300 (-)
G1138640 NA non-coding downstream 69881 5287373 ~ 5287611 (-)
G1138700 NA non-coding upstream 6175 5365675 ~ 5365938 (-)
G1138704 NA non-coding upstream 18308 5377808 ~ 5378866 (-)
G1138706 NA non-coding upstream 29066 5388566 ~ 5388832 (-)
G1138696 NA non-coding upstream 62428 5421928 ~ 5423529 (-)
G1138692 NA non-coding upstream 67490 5426990 ~ 5427341 (-)
G1138553 LOC106592646 other downstream 94979 5201055 ~ 5262513 (-)
G1138568 NA other downstream 194538 5158165 ~ 5162954 (-)
G1138232 NA other downstream 737628 4619495 ~ 4620179 (-)
G1138151 LOC106606801 other downstream 936232 4394745 ~ 4421260 (-)
LOC110512654 LOC106592307 other upstream 685357 6044857 ~ 6058622 (-)
G1139916 NA other upstream 732859 6092359 ~ 6093516 (-)
LOC110485426 LOC106594040 other upstream 1246819 6600141 ~ 6649233 (-)
LOC118938170 LOC106564207 other upstream 1338882 6698319 ~ 6717102 (-)

Expression


Co-expression Network