Gene
RNA
| Item | Value |
|---|---|
| gene id | G1138704 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 5377808 ~ 5378866 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1297866 | True | 257 | lncRNA | 0.46 | 3 | 5377808 | 5378866 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485445 | LOC106564237 | coding | downstream | 96945 | 5278946 ~ 5280863 (-) |
| LOC110516762 | LOC106592646 | coding | downstream | 111321 | 5245446 ~ 5266487 (-) |
| LOC118936520 | NA | coding | downstream | 133367 | 5216411 ~ 5244441 (-) |
| LOC118938162 | LOC106592646 | coding | downstream | 166299 | 5200479 ~ 5211509 (-) |
| LOC118938161 | LOC106592320 | coding | downstream | 199891 | 5168329 ~ 5177917 (-) |
| LOC110517601 | tmed1 | coding | upstream | 206188 | 5585054 ~ 5595560 (-) |
| LOC110516670 | LOC106592431 | coding | upstream | 247745 | 5626611 ~ 5629846 (-) |
| LOC118938515 | LOC106592948 | coding | upstream | 292571 | 5671437 ~ 5678473 (-) |
| LOC110487505 | LOC106593267 | coding | upstream | 300298 | 5679164 ~ 5756340 (-) |
| LOC110485432 | LOC106593320 | coding | upstream | 377867 | 5756733 ~ 5783389 (-) |
| G1138700 | NA | non-coding | downstream | 11870 | 5365675 ~ 5365938 (-) |
| G1138691 | NA | non-coding | downstream | 18308 | 5357492 ~ 5359500 (-) |
| G1138664 | NA | non-coding | downstream | 34730 | 5342648 ~ 5343078 (-) |
| G1138663 | NA | non-coding | downstream | 35370 | 5341978 ~ 5342438 (-) |
| G1138655 | NA | non-coding | downstream | 48084 | 5322301 ~ 5329724 (-) |
| G1138706 | NA | non-coding | upstream | 9700 | 5388566 ~ 5388832 (-) |
| G1138696 | NA | non-coding | upstream | 43062 | 5421928 ~ 5423529 (-) |
| G1138692 | NA | non-coding | upstream | 48124 | 5426990 ~ 5427341 (-) |
| G1138698 | NA | non-coding | upstream | 48656 | 5427522 ~ 5428065 (-) |
| G1138694 | NA | non-coding | upstream | 51824 | 5430690 ~ 5431386 (-) |
| G1138553 | LOC106592646 | other | downstream | 115295 | 5201055 ~ 5262513 (-) |
| G1138568 | NA | other | downstream | 214854 | 5158165 ~ 5162954 (-) |
| G1138232 | NA | other | downstream | 757944 | 4619495 ~ 4620179 (-) |
| G1138151 | LOC106606801 | other | downstream | 956548 | 4394745 ~ 4421260 (-) |
| LOC110512654 | LOC106592307 | other | upstream | 665991 | 6044857 ~ 6058622 (-) |
| G1139916 | NA | other | upstream | 713493 | 6092359 ~ 6093516 (-) |
| LOC110485426 | LOC106594040 | other | upstream | 1227453 | 6600141 ~ 6649233 (-) |
| LOC118938170 | LOC106564207 | other | upstream | 1319516 | 6698319 ~ 6717102 (-) |
