G1138716


Basic Information

Item Value
gene id G1138716
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 5457262 ~ 5457722 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1297878
tgcgcacacacacacacacacacactcgcaccaGTGTGGTTGTTGAAGTGGTTTTGGCCGAAGATGTCGGAAAATAAATCAAATGGATCATAAAAGTCtgcctctactccctctccctttACTGTGATAATATATACACTCTCTCCCTTTACTGTGATAATATATACACACTCTCcctttactGTGATAATATATACACTCTCTCCCTTTACTGTGATAATATATACACTCTCTCCCTTTACTGtgataatatatacacacacacacactcactctctccctttactgtgataatatatacacacacacacactcactctctc
>TU1297879
tgcgcacacacacacacacacacactcgcaccaGTGTGGTTGTTGAAGTGGTTTTGGCCGAAGATGTCGGAAAATAAATCAAATGGATCATAAAAGTCtgcctctactccctctccctttACTGTGATAATATATACACTCTCTCCCTTTACTGTGATAATATATACACtctctccctttactGTGATAATATATACACTCTCTCCCTTTACTGTGATAATATATACACTCTCTCCCTTTACTGtgataatatatacacacacacacactcactctctccctttactgtgataatatatacacacacacacactcactctctc
>TU1297880
tgcgcacacacacacacacacacactcgcaccaGTGTGGTTGTTGAAGTGGTTTTGGCCGAAGATGTCGGAAAATAAATCAAATGGATCATAAAAGTCtgcctctactccctctccctttACTGTGATAATATATACACTCTCTCCCTTTACTGTGATAATATATACACACTCTCTCCCTTTACTGtgataatatatacacacTCTCTCCCTTTACTGtgataatatatacacacactcactctctccctttactGTGATAATATATACACTCTCTCCCTTTACTGTGATAATATATACACTCTCTCCCTTTACTGtgataatatatacacacacacacactcactctctccctttactgtgataatatatacacacacacacactcactctctc
>TU1297881
tgcgcacacacacacacacacacactcgcaccaGTGTGGTTGTTGAAGTGGTTTTGGCCGAAGATGTCGGAAAATAAATCAAATGGATCATAAAAGTCtgcctctactccctctccctttACTGTGATAATATATACACTCTCTCCCTTTACTGTGATAATATATACACACTCTCCCTTTACTGTGATAATATATACACTCTCTCCCTTTACTGtgataatatatacacacactcactctctccctttactGTGATAATATATACACTCTCTCCCTTTACTGTGATAATATATACACTCTCTCCCTTTACTGtgataatatatacacacacacacactcactctctccctttactgtgataatatatacacacacacacactcactctctc

Function

NR:

description
inosine-5'-monophosphate dehydrogenase 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1297878 False 323 lncRNA 0.40 2 5457262 5457722
TU1297879 False 323 lncRNA 0.40 2 5457262 5457722
TU1297880 False 395 lncRNA 0.39 2 5457262 5457722
TU1297881 True 391 lncRNA 0.39 2 5457262 5457722

Neighbor

gene id symbol gene type direction distance location
LOC110485445 LOC106564237 coding downstream 176399 5278946 ~ 5280863 (-)
LOC110516762 LOC106592646 coding downstream 190775 5245446 ~ 5266487 (-)
LOC118936520 NA coding downstream 212821 5216411 ~ 5244441 (-)
LOC118938162 LOC106592646 coding downstream 245753 5200479 ~ 5211509 (-)
LOC118938161 LOC106592320 coding downstream 279345 5168329 ~ 5177917 (-)
LOC110517601 tmed1 coding upstream 127332 5585054 ~ 5595560 (-)
LOC110516670 LOC106592431 coding upstream 168889 5626611 ~ 5629846 (-)
LOC118938515 LOC106592948 coding upstream 213715 5671437 ~ 5678473 (-)
LOC110487505 LOC106593267 coding upstream 221442 5679164 ~ 5756340 (-)
LOC110485432 LOC106593320 coding upstream 299011 5756733 ~ 5783389 (-)
G1138688 LOC106564208 non-coding downstream 205 5431673 ~ 5457057 (-)
G1138693 LOC106592549 non-coding downstream 16114 5440260 ~ 5441148 (-)
G1138694 NA non-coding downstream 25876 5430690 ~ 5431386 (-)
G1138698 NA non-coding downstream 29197 5427522 ~ 5428065 (-)
G1138692 NA non-coding downstream 29921 5426990 ~ 5427341 (-)
G1138720 NA non-coding upstream 978 5458700 ~ 5459586 (-)
G1138721 NA non-coding upstream 1938 5459660 ~ 5459914 (-)
G1138722 NA non-coding upstream 2201 5459923 ~ 5460486 (-)
G1138723 NA non-coding upstream 3074 5460796 ~ 5461164 (-)
G1138724 NA non-coding upstream 3473 5461195 ~ 5461517 (-)
G1138553 LOC106592646 other downstream 194749 5201055 ~ 5262513 (-)
G1138568 NA other downstream 294308 5158165 ~ 5162954 (-)
G1138232 NA other downstream 837398 4619495 ~ 4620179 (-)
G1138151 LOC106606801 other downstream 1036002 4394745 ~ 4421260 (-)
LOC110512654 LOC106592307 other upstream 587135 6044857 ~ 6058622 (-)
G1139916 NA other upstream 634637 6092359 ~ 6093516 (-)
LOC110485426 LOC106594040 other upstream 1148597 6600141 ~ 6649233 (-)
LOC118938170 LOC106564207 other upstream 1240660 6698319 ~ 6717102 (-)

Expression


Co-expression Network