G1138720


Basic Information

Item Value
gene id G1138720
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 5458700 ~ 5459586 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1297888
cttctctcatacCATTAAAACACACTGAGttcaccctcctctcttctctcatatCATTAAAACACACTGAGTTCACCCTCCTTTCTTCGTCTCTCCTATCATTAAAACACACTGAGTTCACCCTCCTCTCTTCGTCTCTCCTATCATTAAAACACACTATGAGTtcatcctcctctacccttcttctctccctgtcttaaTAAACCTCCCGAGTGGTGcggtggtctaaggcattgcatcgcagtgctaggggggtcactacagacccgggttccatcccgggctgtatcacaaccggccgtgacgggagtcccatagggtttggctggggtaggccatcattgtaaataagaatttgttcttaaccgacttggcctcgttgaataaaggttaaatgaagaaATGTGTTGCACTTCCATTCATGGTTATgttgtatgttgtgttgtgtctcatgtatgtataactacagtatacactaaatgaccaaaagtatgtggaaacctgcTCATCTTACATCCCacaatcattggcattaatatggagttgatcccccccccccccccccccccctttgctgctataacagcctccactcttctgggaagaatttccactagatgttggaacatttctgtggggacttgcttccattcagcctcgagcattagtgaggtcggacactgatgttatGCGATTTAGGCCTgacttgcagtcggcgttccaattcattccaaaggtgttcgatggggttgaggtcagggatctgtgcatgccagtcaagttcttccacaccgatcttgacaaaccatttctgtatggatctcgctttgtgcacaggggcaggaaatggccttccccaaacttttgccacaaagttggaagcacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1297888 True 887 lncRNA 0.47 1 5458700 5459586

Neighbor

gene id symbol gene type direction distance location
LOC110485445 LOC106564237 coding downstream 177837 5278946 ~ 5280863 (-)
LOC110516762 LOC106592646 coding downstream 192213 5245446 ~ 5266487 (-)
LOC118936520 NA coding downstream 214259 5216411 ~ 5244441 (-)
LOC118938162 LOC106592646 coding downstream 247191 5200479 ~ 5211509 (-)
LOC118938161 LOC106592320 coding downstream 280783 5168329 ~ 5177917 (-)
LOC110517601 tmed1 coding upstream 125468 5585054 ~ 5595560 (-)
LOC110516670 LOC106592431 coding upstream 167025 5626611 ~ 5629846 (-)
LOC118938515 LOC106592948 coding upstream 211851 5671437 ~ 5678473 (-)
LOC110487505 LOC106593267 coding upstream 219578 5679164 ~ 5756340 (-)
LOC110485432 LOC106593320 coding upstream 297147 5756733 ~ 5783389 (-)
G1138716 NA non-coding downstream 978 5457262 ~ 5457722 (-)
G1138688 LOC106564208 non-coding downstream 1643 5431673 ~ 5457057 (-)
G1138693 LOC106592549 non-coding downstream 17552 5440260 ~ 5441148 (-)
G1138694 NA non-coding downstream 27314 5430690 ~ 5431386 (-)
G1138698 NA non-coding downstream 30635 5427522 ~ 5428065 (-)
G1138721 NA non-coding upstream 74 5459660 ~ 5459914 (-)
G1138722 NA non-coding upstream 337 5459923 ~ 5460486 (-)
G1138723 NA non-coding upstream 1210 5460796 ~ 5461164 (-)
G1138724 NA non-coding upstream 1609 5461195 ~ 5461517 (-)
G1138726 NA non-coding upstream 2255 5461841 ~ 5462248 (-)
G1138553 LOC106592646 other downstream 196187 5201055 ~ 5262513 (-)
G1138568 NA other downstream 295746 5158165 ~ 5162954 (-)
G1138232 NA other downstream 838836 4619495 ~ 4620179 (-)
G1138151 LOC106606801 other downstream 1037440 4394745 ~ 4421260 (-)
LOC110512654 LOC106592307 other upstream 585271 6044857 ~ 6058622 (-)
G1139916 NA other upstream 632773 6092359 ~ 6093516 (-)
LOC110485426 LOC106594040 other upstream 1146733 6600141 ~ 6649233 (-)
LOC118938170 LOC106564207 other upstream 1238796 6698319 ~ 6717102 (-)

Expression


Co-expression Network