Gene
RNA
| Item | Value |
|---|---|
| gene id | G1138723 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 5460796 ~ 5461164 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1297891 | True | 369 | lncRNA | 0.48 | 1 | 5460796 | 5461164 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485445 | LOC106564237 | coding | downstream | 179933 | 5278946 ~ 5280863 (-) |
| LOC110516762 | LOC106592646 | coding | downstream | 194309 | 5245446 ~ 5266487 (-) |
| LOC118936520 | NA | coding | downstream | 216355 | 5216411 ~ 5244441 (-) |
| LOC118938162 | LOC106592646 | coding | downstream | 249287 | 5200479 ~ 5211509 (-) |
| LOC118938161 | LOC106592320 | coding | downstream | 282879 | 5168329 ~ 5177917 (-) |
| LOC110517601 | tmed1 | coding | upstream | 123890 | 5585054 ~ 5595560 (-) |
| LOC110516670 | LOC106592431 | coding | upstream | 165447 | 5626611 ~ 5629846 (-) |
| LOC118938515 | LOC106592948 | coding | upstream | 210273 | 5671437 ~ 5678473 (-) |
| LOC110487505 | LOC106593267 | coding | upstream | 218000 | 5679164 ~ 5756340 (-) |
| LOC110485432 | LOC106593320 | coding | upstream | 295569 | 5756733 ~ 5783389 (-) |
| G1138722 | NA | non-coding | downstream | 310 | 5459923 ~ 5460486 (-) |
| G1138721 | NA | non-coding | downstream | 882 | 5459660 ~ 5459914 (-) |
| G1138720 | NA | non-coding | downstream | 1210 | 5458700 ~ 5459586 (-) |
| G1138716 | NA | non-coding | downstream | 3074 | 5457262 ~ 5457722 (-) |
| G1138688 | LOC106564208 | non-coding | downstream | 3739 | 5431673 ~ 5457057 (-) |
| G1138724 | NA | non-coding | upstream | 31 | 5461195 ~ 5461517 (-) |
| G1138726 | NA | non-coding | upstream | 677 | 5461841 ~ 5462248 (-) |
| G1138735 | NA | non-coding | upstream | 9811 | 5470975 ~ 5471278 (-) |
| G1138736 | NA | non-coding | upstream | 10185 | 5471349 ~ 5471769 (-) |
| G1138741 | NA | non-coding | upstream | 13618 | 5474782 ~ 5474997 (-) |
| G1138553 | LOC106592646 | other | downstream | 198283 | 5201055 ~ 5262513 (-) |
| G1138568 | NA | other | downstream | 297842 | 5158165 ~ 5162954 (-) |
| G1138232 | NA | other | downstream | 840932 | 4619495 ~ 4620179 (-) |
| G1138151 | LOC106606801 | other | downstream | 1039536 | 4394745 ~ 4421260 (-) |
| LOC110512654 | LOC106592307 | other | upstream | 583693 | 6044857 ~ 6058622 (-) |
| G1139916 | NA | other | upstream | 631195 | 6092359 ~ 6093516 (-) |
| LOC110485426 | LOC106594040 | other | upstream | 1145155 | 6600141 ~ 6649233 (-) |
| LOC118938170 | LOC106564207 | other | upstream | 1237218 | 6698319 ~ 6717102 (-) |
