Gene
RNA
| Item | Value |
|---|---|
| gene id | G1139756 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 5538072 ~ 5538625 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1299325 | True | 204 | lncRNA | 0.42 | 2 | 5538072 | 5538625 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485445 | LOC106564237 | coding | downstream | 257209 | 5278946 ~ 5280863 (-) |
| LOC110516762 | LOC106592646 | coding | downstream | 271585 | 5245446 ~ 5266487 (-) |
| LOC118936520 | NA | coding | downstream | 293631 | 5216411 ~ 5244441 (-) |
| LOC118938162 | LOC106592646 | coding | downstream | 326563 | 5200479 ~ 5211509 (-) |
| LOC118938161 | LOC106592320 | coding | downstream | 360155 | 5168329 ~ 5177917 (-) |
| LOC110517601 | tmed1 | coding | upstream | 46429 | 5585054 ~ 5595560 (-) |
| LOC110516670 | LOC106592431 | coding | upstream | 87986 | 5626611 ~ 5629846 (-) |
| LOC118938515 | LOC106592948 | coding | upstream | 132812 | 5671437 ~ 5678473 (-) |
| LOC110487505 | LOC106593267 | coding | upstream | 140539 | 5679164 ~ 5756340 (-) |
| LOC110485432 | LOC106593320 | coding | upstream | 218108 | 5756733 ~ 5783389 (-) |
| G1139726 | LOC106592593 | non-coding | downstream | 15273 | 5518703 ~ 5522799 (-) |
| G1139725 | NA | non-coding | downstream | 19583 | 5517996 ~ 5518489 (-) |
| G1138753 | NA | non-coding | downstream | 57789 | 5480066 ~ 5480283 (-) |
| G1138741 | NA | non-coding | downstream | 63075 | 5474782 ~ 5474997 (-) |
| G1138736 | NA | non-coding | downstream | 66303 | 5471349 ~ 5471769 (-) |
| G1139764 | NA | non-coding | upstream | 16822 | 5555447 ~ 5556011 (-) |
| G1139768 | NA | non-coding | upstream | 47934 | 5586559 ~ 5587464 (-) |
| G1139785 | NA | non-coding | upstream | 85497 | 5624122 ~ 5624323 (-) |
| G1139790 | NA | non-coding | upstream | 105120 | 5643745 ~ 5643960 (-) |
| G1139791 | NA | non-coding | upstream | 106118 | 5644743 ~ 5645043 (-) |
| G1138553 | LOC106592646 | other | downstream | 275559 | 5201055 ~ 5262513 (-) |
| G1138568 | NA | other | downstream | 375118 | 5158165 ~ 5162954 (-) |
| G1138232 | NA | other | downstream | 918208 | 4619495 ~ 4620179 (-) |
| G1138151 | LOC106606801 | other | downstream | 1116812 | 4394745 ~ 4421260 (-) |
| LOC110512654 | LOC106592307 | other | upstream | 506232 | 6044857 ~ 6058622 (-) |
| G1139916 | NA | other | upstream | 553734 | 6092359 ~ 6093516 (-) |
| LOC110485426 | LOC106594040 | other | upstream | 1067694 | 6600141 ~ 6649233 (-) |
| LOC118938170 | LOC106564207 | other | upstream | 1159757 | 6698319 ~ 6717102 (-) |
