G1139764


Basic Information

Item Value
gene id G1139764
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 5555447 ~ 5556011 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1299333
CCTTtatctctttattattccataTCACATCTCTATCCACCTTCTTCACACTACGATCCATTCCTTTTTTAATGTATCATGTCATTCATCTGTTCATCCAATAGGAAAGCCACAGGTAAGAGGCACTTAGAAAAATAGAAAAAGtcatttttaaaaaacaatacaaaagaGTCTGaaacggcatcctattccctatgtggtgcactaccCCCTCTGTCTGCATTCTGATTGGTCCATTCAGGAAACAGGTCCATTTTGATTGGTCCATTCAGGAAGCAGGTCTATTTTGAATGGTCTATTCAGGAAGCAGAGGCCAGATTGACAGCAAGCTACCATTTACAATAGACTGGGCTAAAAGCCGGGATTTCATTAAAGAAGCGATAAGCAAACAACACTCTCAACAGTGATCCTTTTAAAGGGAATTTCCAAGATGTTTGCAGAGATGTTGCATTTGCGGTAAACGCTGCGGATGTCATGAATGACCTTTTAAAAGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1299333 True 496 lncRNA 0.39 2 5555447 5556011

Neighbor

gene id symbol gene type direction distance location
LOC110485445 LOC106564237 coding downstream 274584 5278946 ~ 5280863 (-)
LOC110516762 LOC106592646 coding downstream 288960 5245446 ~ 5266487 (-)
LOC118936520 NA coding downstream 311006 5216411 ~ 5244441 (-)
LOC118938162 LOC106592646 coding downstream 343938 5200479 ~ 5211509 (-)
LOC118938161 LOC106592320 coding downstream 377530 5168329 ~ 5177917 (-)
LOC110517601 tmed1 coding upstream 29043 5585054 ~ 5595560 (-)
LOC110516670 LOC106592431 coding upstream 70600 5626611 ~ 5629846 (-)
LOC118938515 LOC106592948 coding upstream 115426 5671437 ~ 5678473 (-)
LOC110487505 LOC106593267 coding upstream 123153 5679164 ~ 5756340 (-)
LOC110485432 LOC106593320 coding upstream 200722 5756733 ~ 5783389 (-)
G1139756 NA non-coding downstream 16822 5538072 ~ 5538625 (-)
G1139726 LOC106592593 non-coding downstream 32648 5518703 ~ 5522799 (-)
G1139725 NA non-coding downstream 36958 5517996 ~ 5518489 (-)
G1138753 NA non-coding downstream 75164 5480066 ~ 5480283 (-)
G1138741 NA non-coding downstream 80450 5474782 ~ 5474997 (-)
G1139768 NA non-coding upstream 30548 5586559 ~ 5587464 (-)
G1139785 NA non-coding upstream 68111 5624122 ~ 5624323 (-)
G1139790 NA non-coding upstream 87734 5643745 ~ 5643960 (-)
G1139791 NA non-coding upstream 88732 5644743 ~ 5645043 (-)
G1139770 NA non-coding upstream 104245 5660256 ~ 5661215 (-)
G1138553 LOC106592646 other downstream 292934 5201055 ~ 5262513 (-)
G1138568 NA other downstream 392493 5158165 ~ 5162954 (-)
G1138232 NA other downstream 935583 4619495 ~ 4620179 (-)
G1138151 LOC106606801 other downstream 1134187 4394745 ~ 4421260 (-)
LOC110512654 LOC106592307 other upstream 488846 6044857 ~ 6058622 (-)
G1139916 NA other upstream 536348 6092359 ~ 6093516 (-)
LOC110485426 LOC106594040 other upstream 1050308 6600141 ~ 6649233 (-)
LOC118938170 LOC106564207 other upstream 1142371 6698319 ~ 6717102 (-)

Expression


Co-expression Network