G1139768


Basic Information

Item Value
gene id G1139768
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 5586559 ~ 5587464 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1299337
CGGGTGTGGTAGGTCGGCGGTATGGTAGGTCACTGCGTGATTGAAAACGGACATGGTATATTAAACATATTTAATATATTTCACATGTTTTTGCTACTGAGGAGCAGCCAATTACCAAGCACCCATAACGTCAATAGcagggtgttcaactctgaccctacgaaaTATACCACTCCCTGTTTAACCTCCAGAACACAGACCTAACTataactctatataccctagtacagggAGTTCAACTCTGGGGAGACGTGGTCCTGGGGTTCAAAATATaatacacaacacacatcacgacCAGAGAGACCTGGGGAGACGTGGTCCTGGGGTtcaaaatataatacaatacacacatCACGACACGAGAGACCTGGGGAGACGTGGTCCTGGGGTTCAAAATATAatacacacatcacgacaagagagacctgGGGAGACGTGGTCCTGGGGTTCAAAATATaatacacaacacacatcacgacaagagagacctgGGGAGACGTGGTCCTGGGGTTCAAAATATaatacacaacacacatcacgacaagagagacctgGGGAGACGTGGTCCTGGGGTTCAAAATATaatacacaacacacatcacgacaagagagacCTGGGGAGACGTGGTCCTGGGGTTCAAAATATaatacacaacacacatcacgacaagagagacctgGGGAGACGTGGTCCTGGGGTTCAAAATATaatacacaacacacatcacgacCAGAGAGACCTGGGGAGACGTGGTCCTGGGGTTCAAAATATAATacaac

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1299337 True 780 lncRNA 0.46 2 5586559 5587464

Neighbor

gene id symbol gene type direction distance location
LOC110485445 LOC106564237 coding downstream 305696 5278946 ~ 5280863 (-)
LOC110516762 LOC106592646 coding downstream 320072 5245446 ~ 5266487 (-)
LOC118936520 NA coding downstream 342118 5216411 ~ 5244441 (-)
LOC118938162 LOC106592646 coding downstream 375050 5200479 ~ 5211509 (-)
LOC118938161 LOC106592320 coding downstream 408642 5168329 ~ 5177917 (-)
LOC110516670 LOC106592431 coding upstream 39147 5626611 ~ 5629846 (-)
LOC118938515 LOC106592948 coding upstream 83973 5671437 ~ 5678473 (-)
LOC110487505 LOC106593267 coding upstream 91700 5679164 ~ 5756340 (-)
LOC110485432 LOC106593320 coding upstream 169269 5756733 ~ 5783389 (-)
nxnl1 LOC106592756 coding upstream 206845 5794309 ~ 5799274 (-)
G1139764 NA non-coding downstream 30548 5555447 ~ 5556011 (-)
G1139756 NA non-coding downstream 47934 5538072 ~ 5538625 (-)
G1139726 LOC106592593 non-coding downstream 63760 5518703 ~ 5522799 (-)
G1139725 NA non-coding downstream 68070 5517996 ~ 5518489 (-)
G1138753 NA non-coding downstream 106276 5480066 ~ 5480283 (-)
G1139785 NA non-coding upstream 36658 5624122 ~ 5624323 (-)
G1139790 NA non-coding upstream 56281 5643745 ~ 5643960 (-)
G1139791 NA non-coding upstream 57279 5644743 ~ 5645043 (-)
G1139770 NA non-coding upstream 72792 5660256 ~ 5661215 (-)
G1139797 NA non-coding upstream 73940 5661404 ~ 5664528 (-)
G1138553 LOC106592646 other downstream 324046 5201055 ~ 5262513 (-)
G1138568 NA other downstream 423605 5158165 ~ 5162954 (-)
G1138232 NA other downstream 966695 4619495 ~ 4620179 (-)
G1138151 LOC106606801 other downstream 1165299 4394745 ~ 4421260 (-)
LOC110512654 LOC106592307 other upstream 457393 6044857 ~ 6058622 (-)
G1139916 NA other upstream 504895 6092359 ~ 6093516 (-)
LOC110485426 LOC106594040 other upstream 1018855 6600141 ~ 6649233 (-)
LOC118938170 LOC106564207 other upstream 1110918 6698319 ~ 6717102 (-)

Expression


Co-expression Network