Gene
RNA
| Item | Value |
|---|---|
| gene id | G1139790 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 5643745 ~ 5643960 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1299363 | True | 216 | lncRNA | 0.43 | 1 | 5643745 | 5643960 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516670 | LOC106592431 | coding | downstream | 13899 | 5626611 ~ 5629846 (-) |
| LOC110517601 | tmed1 | coding | downstream | 48185 | 5585054 ~ 5595560 (-) |
| LOC110485445 | LOC106564237 | coding | downstream | 362882 | 5278946 ~ 5280863 (-) |
| LOC110516762 | LOC106592646 | coding | downstream | 377258 | 5245446 ~ 5266487 (-) |
| LOC118936520 | NA | coding | downstream | 399304 | 5216411 ~ 5244441 (-) |
| LOC118938515 | LOC106592948 | coding | upstream | 27477 | 5671437 ~ 5678473 (-) |
| LOC110487505 | LOC106593267 | coding | upstream | 35204 | 5679164 ~ 5756340 (-) |
| LOC110485432 | LOC106593320 | coding | upstream | 112773 | 5756733 ~ 5783389 (-) |
| nxnl1 | LOC106592756 | coding | upstream | 150349 | 5794309 ~ 5799274 (-) |
| LOC110519495 | LOC106566240 | coding | upstream | 184440 | 5828400 ~ 6076863 (-) |
| G1139785 | NA | non-coding | downstream | 19422 | 5624122 ~ 5624323 (-) |
| G1139768 | NA | non-coding | downstream | 56281 | 5586559 ~ 5587464 (-) |
| G1139764 | NA | non-coding | downstream | 87734 | 5555447 ~ 5556011 (-) |
| G1139756 | NA | non-coding | downstream | 105120 | 5538072 ~ 5538625 (-) |
| G1139726 | LOC106592593 | non-coding | downstream | 120946 | 5518703 ~ 5522799 (-) |
| G1139791 | NA | non-coding | upstream | 783 | 5644743 ~ 5645043 (-) |
| G1139770 | NA | non-coding | upstream | 16296 | 5660256 ~ 5661215 (-) |
| G1139797 | NA | non-coding | upstream | 17444 | 5661404 ~ 5664528 (-) |
| G1139798 | NA | non-coding | upstream | 21056 | 5665016 ~ 5665341 (-) |
| G1139740 | NA | non-coding | upstream | 23359 | 5667319 ~ 5667734 (-) |
| G1138553 | LOC106592646 | other | downstream | 381232 | 5201055 ~ 5262513 (-) |
| G1138568 | NA | other | downstream | 480791 | 5158165 ~ 5162954 (-) |
| G1138232 | NA | other | downstream | 1023881 | 4619495 ~ 4620179 (-) |
| G1138151 | LOC106606801 | other | downstream | 1222485 | 4394745 ~ 4421260 (-) |
| LOC110512654 | LOC106592307 | other | upstream | 400897 | 6044857 ~ 6058622 (-) |
| G1139916 | NA | other | upstream | 448399 | 6092359 ~ 6093516 (-) |
| LOC110485426 | LOC106594040 | other | upstream | 962359 | 6600141 ~ 6649233 (-) |
| LOC118938170 | LOC106564207 | other | upstream | 1054422 | 6698319 ~ 6717102 (-) |
