G1139770


Basic Information

Item Value
gene id G1139770
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 5660256 ~ 5661215 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1299341
taacacaaagaaacacacagacCCCTAACTGACGGTGTGGTGACGGGGGTTGTCCAGGCTGTAGTCTAAACATGAGGGAGATGTGGAGACAGGGGGTTGTCCAGgctaggagagagggtagagctgTAGTCTTTAAACATGGAGGAGATGTGGAGACAGGGGGTTGTCCAGgctaggagagagggtagagctgTAGTCTAAACATTGAGGAGATGTGGAGACAGGGGGTTGTCCAGgctaggagagagggtagagctgTAGTCTTTAAACATGGAGGAGATGTGGAGACAGGGGGTTGTCCAGgctaggagagagggtagagctgTAGTCTTTAGACATGGAGGAGATGTGGAGACAGGGGGTTGTCCAGgctaggagagagggtagagctgTAGTCTTTAAACATGGAGGAGATGTGGAGACAGGGGGTTGTCCAGgctaggagagagggtagagctgTAGTCTTTAAACATGGAGGAGATGTGGAGACAGGGGGTTGTCCAGgctaggagagagggtagagctgTAGTCTTTAAACATGGAGGAGAcgtggagacagggggttgtCCAGGCTAGGAGATAGGGTAGAGCTGTAGTCTTTAAACATGGAGGAGAcgtggagacagggggttgtccaggctaggagagagggtagagctgTAGTCTTTAAACATGGAGGAGATGTGGAGACAGGGGGTTGTCCAGgctaggagagagggtagagctgTAGTCTTTAAACATGGAGGAGATGTAGAGACAGGGGGTTGTCCAGgctaggagagagggtagagctgTAGTCTTTAAACATGGAGGAGAcgtggagacagggggttgtccaggctaggagagagggtagagctgTAGTCTTTAAACATGGAGGAGCTAGGAGACGGGGGGTTGTCCAGgctaggagagagggtagagctgTAGTCTTTAAACATGGAGGAGACGTGGAAGgcc

Function

NR:

description
PREDICTED: lipid phosphate phosphohydrolase 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1299341 True 960 lncRNA 0.53 1 5660256 5661215

Neighbor

gene id symbol gene type direction distance location
LOC110516670 LOC106592431 coding downstream 30410 5626611 ~ 5629846 (-)
LOC110517601 tmed1 coding downstream 64696 5585054 ~ 5595560 (-)
LOC110485445 LOC106564237 coding downstream 379393 5278946 ~ 5280863 (-)
LOC110516762 LOC106592646 coding downstream 393769 5245446 ~ 5266487 (-)
LOC118936520 NA coding downstream 415815 5216411 ~ 5244441 (-)
LOC118938515 LOC106592948 coding upstream 10222 5671437 ~ 5678473 (-)
LOC110487505 LOC106593267 coding upstream 17949 5679164 ~ 5756340 (-)
LOC110485432 LOC106593320 coding upstream 95518 5756733 ~ 5783389 (-)
nxnl1 LOC106592756 coding upstream 133094 5794309 ~ 5799274 (-)
LOC110519495 LOC106566240 coding upstream 167185 5828400 ~ 6076863 (-)
G1139791 NA non-coding downstream 15213 5644743 ~ 5645043 (-)
G1139790 NA non-coding downstream 16296 5643745 ~ 5643960 (-)
G1139785 NA non-coding downstream 35933 5624122 ~ 5624323 (-)
G1139768 NA non-coding downstream 72792 5586559 ~ 5587464 (-)
G1139764 NA non-coding downstream 104245 5555447 ~ 5556011 (-)
G1139797 NA non-coding upstream 189 5661404 ~ 5664528 (-)
G1139798 NA non-coding upstream 3801 5665016 ~ 5665341 (-)
G1139740 NA non-coding upstream 6104 5667319 ~ 5667734 (-)
G1139736 NA non-coding upstream 6787 5668002 ~ 5668845 (-)
G1139748 NA non-coding upstream 7869 5669084 ~ 5669361 (-)
G1138553 LOC106592646 other downstream 397743 5201055 ~ 5262513 (-)
G1138568 NA other downstream 497302 5158165 ~ 5162954 (-)
G1138232 NA other downstream 1040392 4619495 ~ 4620179 (-)
G1138151 LOC106606801 other downstream 1238996 4394745 ~ 4421260 (-)
LOC110512654 LOC106592307 other upstream 383642 6044857 ~ 6058622 (-)
G1139916 NA other upstream 431144 6092359 ~ 6093516 (-)
LOC110485426 LOC106594040 other upstream 945104 6600141 ~ 6649233 (-)
LOC118938170 LOC106564207 other upstream 1037167 6698319 ~ 6717102 (-)

Expression


Co-expression Network