G1139798



Basic Information


Item Value
gene id G1139798
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 5665016 ~ 5665341 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1299373
tcataatgtctggagtggaagggctgtaaaaacacaggaggctgttggggaggacggctcataatgtctggagtggaagggctgtaaaaacagaaggaaaccatgtgtttgataccagtcacttcactacattccacCCATCACTATGAGCGCTTCCTCCCCAATTAACAAGGTGCCCCCCAGTCGCATGTGGTGTGGTACAAAATACTACATGTACTGTGCCTGTGTGATTGGTGAATCATTTGGATATATGTAGTAGAAAATACTAATAGTACCGTGTTAGTGGTGAATCATTTGGATATATGTAGTAGAAAATACTAATAGTA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1299373 True 326 lncRNA 0.42 1 5665016 5665341

Neighbor


gene id symbol gene type direction distance location
LOC110516670 LOC106592431 coding downstream 35170 5626611 ~ 5629846 (-)
LOC110517601 tmed1 coding downstream 69456 5585054 ~ 5595560 (-)
LOC110485445 LOC106564237 coding downstream 384153 5278946 ~ 5280863 (-)
LOC110516762 LOC106592646 coding downstream 398529 5245446 ~ 5266487 (-)
LOC118936520 NA coding downstream 420575 5216411 ~ 5244441 (-)
LOC118938515 LOC106592948 coding upstream 6096 5671437 ~ 5678473 (-)
LOC110487505 LOC106593267 coding upstream 13823 5679164 ~ 5756340 (-)
LOC110485432 LOC106593320 coding upstream 91392 5756733 ~ 5783389 (-)
nxnl1 LOC106592756 coding upstream 128968 5794309 ~ 5799274 (-)
LOC110519495 LOC106566240 coding upstream 163059 5828400 ~ 6076863 (-)
G1139797 NA non-coding downstream 488 5661404 ~ 5664528 (-)
G1139770 NA non-coding downstream 3801 5660256 ~ 5661215 (-)
G1139791 NA non-coding downstream 19973 5644743 ~ 5645043 (-)
G1139790 NA non-coding downstream 21056 5643745 ~ 5643960 (-)
G1139785 NA non-coding downstream 40693 5624122 ~ 5624323 (-)
G1139740 NA non-coding upstream 1978 5667319 ~ 5667734 (-)
G1139736 NA non-coding upstream 2661 5668002 ~ 5668845 (-)
G1139748 NA non-coding upstream 3743 5669084 ~ 5669361 (-)
G1139746 NA non-coding upstream 4529 5669870 ~ 5671286 (-)
G1139818 NA non-coding upstream 80333 5745674 ~ 5747167 (-)
G1138553 LOC106592646 other downstream 402503 5201055 ~ 5262513 (-)
G1138568 NA other downstream 502062 5158165 ~ 5162954 (-)
G1138232 NA other downstream 1045152 4619495 ~ 4620179 (-)
G1138151 LOC106606801 other downstream 1243756 4394745 ~ 4421260 (-)
LOC110512654 LOC106592307 other upstream 379516 6044857 ~ 6058622 (-)
G1139916 NA other upstream 427018 6092359 ~ 6093516 (-)
LOC110485426 LOC106594040 other upstream 940978 6600141 ~ 6649233 (-)
LOC118938170 LOC106564207 other upstream 1033041 6698319 ~ 6717102 (-)

Expression



Co-expression Network